Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34972 | 105139;105140;105141 | chr2:178531701;178531700;178531699 | chr2:179396428;179396427;179396426 |
N2AB | 33331 | 100216;100217;100218 | chr2:178531701;178531700;178531699 | chr2:179396428;179396427;179396426 |
N2A | 32404 | 97435;97436;97437 | chr2:178531701;178531700;178531699 | chr2:179396428;179396427;179396426 |
N2B | 25907 | 77944;77945;77946 | chr2:178531701;178531700;178531699 | chr2:179396428;179396427;179396426 |
Novex-1 | 26032 | 78319;78320;78321 | chr2:178531701;178531700;178531699 | chr2:179396428;179396427;179396426 |
Novex-2 | 26099 | 78520;78521;78522 | chr2:178531701;178531700;178531699 | chr2:179396428;179396427;179396426 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.505 | N | 0.591 | 0.367 | 0.437958778045 | gnomAD-4.0.0 | 1.59089E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77239E-05 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs727504918 | 0.69 | 0.742 | N | 0.544 | 0.324 | None | gnomAD-2.1.1 | 2.41E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 5.32E-05 | 0 |
E/K | rs727504918 | 0.69 | 0.742 | N | 0.544 | 0.324 | None | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
E/K | rs727504918 | 0.69 | 0.742 | N | 0.544 | 0.324 | None | gnomAD-4.0.0 | 3.96564E-05 | None | None | None | None | N | None | 1.33472E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25478E-05 | 0 | 1.60087E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2403 | likely_benign | 0.4006 | ambiguous | -0.313 | Destabilizing | 0.505 | D | 0.591 | neutral | N | 0.51724473 | None | None | N |
E/C | 0.9419 | likely_pathogenic | 0.978 | pathogenic | -0.055 | Destabilizing | 0.991 | D | 0.749 | deleterious | None | None | None | None | N |
E/D | 0.1289 | likely_benign | 0.2425 | benign | -0.401 | Destabilizing | 0.001 | N | 0.13 | neutral | N | 0.497869535 | None | None | N |
E/F | 0.882 | likely_pathogenic | 0.9566 | pathogenic | -0.22 | Destabilizing | 0.906 | D | 0.704 | prob.neutral | None | None | None | None | N |
E/G | 0.381 | ambiguous | 0.6078 | pathogenic | -0.512 | Destabilizing | 0.505 | D | 0.619 | neutral | N | 0.511144553 | None | None | N |
E/H | 0.6151 | likely_pathogenic | 0.8191 | pathogenic | 0.015 | Stabilizing | 0.022 | N | 0.376 | neutral | None | None | None | None | N |
E/I | 0.499 | ambiguous | 0.7238 | pathogenic | 0.173 | Stabilizing | 0.906 | D | 0.702 | prob.neutral | None | None | None | None | N |
E/K | 0.2432 | likely_benign | 0.4578 | ambiguous | 0.292 | Stabilizing | 0.742 | D | 0.544 | neutral | N | 0.456137556 | None | None | N |
E/L | 0.5742 | likely_pathogenic | 0.7732 | pathogenic | 0.173 | Stabilizing | 0.826 | D | 0.628 | neutral | None | None | None | None | N |
E/M | 0.5964 | likely_pathogenic | 0.7781 | pathogenic | 0.216 | Stabilizing | 0.991 | D | 0.691 | prob.neutral | None | None | None | None | N |
E/N | 0.3001 | likely_benign | 0.5729 | pathogenic | -0.001 | Destabilizing | 0.404 | N | 0.545 | neutral | None | None | None | None | N |
E/P | 0.8885 | likely_pathogenic | 0.952 | pathogenic | 0.031 | Stabilizing | 0.906 | D | 0.638 | neutral | None | None | None | None | N |
E/Q | 0.2107 | likely_benign | 0.3532 | ambiguous | 0.028 | Stabilizing | 0.189 | N | 0.244 | neutral | N | 0.474896675 | None | None | N |
E/R | 0.4315 | ambiguous | 0.6336 | pathogenic | 0.507 | Stabilizing | 0.826 | D | 0.555 | neutral | None | None | None | None | N |
E/S | 0.2704 | likely_benign | 0.4899 | ambiguous | -0.162 | Destabilizing | 0.404 | N | 0.52 | neutral | None | None | None | None | N |
E/T | 0.2748 | likely_benign | 0.5043 | ambiguous | -0.004 | Destabilizing | 0.826 | D | 0.601 | neutral | None | None | None | None | N |
E/V | 0.2926 | likely_benign | 0.4864 | ambiguous | 0.031 | Stabilizing | 0.879 | D | 0.629 | neutral | N | 0.50493158 | None | None | N |
E/W | 0.9677 | likely_pathogenic | 0.9888 | pathogenic | -0.091 | Destabilizing | 0.991 | D | 0.743 | deleterious | None | None | None | None | N |
E/Y | 0.8116 | likely_pathogenic | 0.9354 | pathogenic | 0.019 | Stabilizing | 0.826 | D | 0.695 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.