Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34984 | 105175;105176;105177 | chr2:178531665;178531664;178531663 | chr2:179396392;179396391;179396390 |
N2AB | 33343 | 100252;100253;100254 | chr2:178531665;178531664;178531663 | chr2:179396392;179396391;179396390 |
N2A | 32416 | 97471;97472;97473 | chr2:178531665;178531664;178531663 | chr2:179396392;179396391;179396390 |
N2B | 25919 | 77980;77981;77982 | chr2:178531665;178531664;178531663 | chr2:179396392;179396391;179396390 |
Novex-1 | 26044 | 78355;78356;78357 | chr2:178531665;178531664;178531663 | chr2:179396392;179396391;179396390 |
Novex-2 | 26111 | 78556;78557;78558 | chr2:178531665;178531664;178531663 | chr2:179396392;179396391;179396390 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1434654451 | None | 0.434 | N | 0.246 | 0.077 | 0.183819452728 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/D | rs1434654451 | None | 0.434 | N | 0.246 | 0.077 | 0.183819452728 | gnomAD-4.0.0 | 8.0552E-06 | None | None | None | None | N | None | 1.3349E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.47545E-06 | 0 | 3.20184E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2137 | likely_benign | 0.2628 | benign | -0.698 | Destabilizing | 0.998 | D | 0.589 | neutral | N | 0.502544636 | None | None | N |
E/C | 0.9559 | likely_pathogenic | 0.9735 | pathogenic | -0.389 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
E/D | 0.3543 | ambiguous | 0.3749 | ambiguous | -0.637 | Destabilizing | 0.434 | N | 0.246 | neutral | N | 0.508894605 | None | None | N |
E/F | 0.9513 | likely_pathogenic | 0.9688 | pathogenic | -0.204 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | N |
E/G | 0.3408 | ambiguous | 0.4394 | ambiguous | -0.99 | Destabilizing | 0.999 | D | 0.629 | neutral | N | 0.476822259 | None | None | N |
E/H | 0.8092 | likely_pathogenic | 0.8689 | pathogenic | -0.138 | Destabilizing | 1.0 | D | 0.64 | neutral | None | None | None | None | N |
E/I | 0.699 | likely_pathogenic | 0.7672 | pathogenic | 0.077 | Stabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | N |
E/K | 0.3507 | ambiguous | 0.458 | ambiguous | -0.286 | Destabilizing | 0.998 | D | 0.49 | neutral | N | 0.509817325 | None | None | N |
E/L | 0.6916 | likely_pathogenic | 0.757 | pathogenic | 0.077 | Stabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
E/M | 0.7421 | likely_pathogenic | 0.7948 | pathogenic | 0.249 | Stabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | N |
E/N | 0.5537 | ambiguous | 0.6102 | pathogenic | -0.694 | Destabilizing | 0.999 | D | 0.626 | neutral | None | None | None | None | N |
E/P | 0.4232 | ambiguous | 0.5081 | ambiguous | -0.161 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
E/Q | 0.2702 | likely_benign | 0.3253 | benign | -0.586 | Destabilizing | 0.999 | D | 0.567 | neutral | N | 0.494733229 | None | None | N |
E/R | 0.5293 | ambiguous | 0.6539 | pathogenic | 0.085 | Stabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
E/S | 0.4182 | ambiguous | 0.4768 | ambiguous | -0.93 | Destabilizing | 0.997 | D | 0.531 | neutral | None | None | None | None | N |
E/T | 0.4778 | ambiguous | 0.5667 | pathogenic | -0.69 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | N |
E/V | 0.4515 | ambiguous | 0.5321 | ambiguous | -0.161 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | D | 0.537254643 | None | None | N |
E/W | 0.9836 | likely_pathogenic | 0.9913 | pathogenic | 0.054 | Stabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
E/Y | 0.8844 | likely_pathogenic | 0.9276 | pathogenic | 0.043 | Stabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.