Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34989 | 105190;105191;105192 | chr2:178531650;178531649;178531648 | chr2:179396377;179396376;179396375 |
N2AB | 33348 | 100267;100268;100269 | chr2:178531650;178531649;178531648 | chr2:179396377;179396376;179396375 |
N2A | 32421 | 97486;97487;97488 | chr2:178531650;178531649;178531648 | chr2:179396377;179396376;179396375 |
N2B | 25924 | 77995;77996;77997 | chr2:178531650;178531649;178531648 | chr2:179396377;179396376;179396375 |
Novex-1 | 26049 | 78370;78371;78372 | chr2:178531650;178531649;178531648 | chr2:179396377;179396376;179396375 |
Novex-2 | 26116 | 78571;78572;78573 | chr2:178531650;178531649;178531648 | chr2:179396377;179396376;179396375 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | rs1187175097 | -0.931 | None | N | 0.105 | 0.097 | 0.107399877778 | gnomAD-2.1.1 | 8.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.77E-05 | 0 |
H/R | rs1187175097 | -0.931 | None | N | 0.105 | 0.097 | 0.107399877778 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
H/R | rs1187175097 | -0.931 | None | N | 0.105 | 0.097 | 0.107399877778 | gnomAD-4.0.0 | 5.57655E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.78034E-06 | 0 | 1.60087E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.4984 | ambiguous | 0.5463 | ambiguous | -0.885 | Destabilizing | 0.031 | N | 0.429 | neutral | None | None | None | None | N |
H/C | 0.23 | likely_benign | 0.2174 | benign | -0.205 | Destabilizing | 0.864 | D | 0.494 | neutral | None | None | None | None | N |
H/D | 0.5277 | ambiguous | 0.61 | pathogenic | -0.185 | Destabilizing | 0.055 | N | 0.4 | neutral | N | 0.496597312 | None | None | N |
H/E | 0.5015 | ambiguous | 0.5533 | ambiguous | -0.079 | Destabilizing | 0.038 | N | 0.289 | neutral | None | None | None | None | N |
H/F | 0.48 | ambiguous | 0.5063 | ambiguous | 0.275 | Stabilizing | 0.038 | N | 0.354 | neutral | None | None | None | None | N |
H/G | 0.5455 | ambiguous | 0.5924 | pathogenic | -1.253 | Destabilizing | 0.072 | N | 0.445 | neutral | None | None | None | None | N |
H/I | 0.4605 | ambiguous | 0.4708 | ambiguous | 0.13 | Stabilizing | 0.356 | N | 0.503 | neutral | None | None | None | None | N |
H/K | 0.2761 | likely_benign | 0.2622 | benign | -0.56 | Destabilizing | 0.016 | N | 0.392 | neutral | None | None | None | None | N |
H/L | 0.2207 | likely_benign | 0.2407 | benign | 0.13 | Stabilizing | 0.055 | N | 0.488 | neutral | N | 0.461041943 | None | None | N |
H/M | 0.6759 | likely_pathogenic | 0.6801 | pathogenic | -0.069 | Destabilizing | 0.628 | D | 0.461 | neutral | None | None | None | None | N |
H/N | 0.2203 | likely_benign | 0.2481 | benign | -0.66 | Destabilizing | 0.055 | N | 0.306 | neutral | N | 0.480299708 | None | None | N |
H/P | 0.839 | likely_pathogenic | 0.8899 | pathogenic | -0.188 | Destabilizing | 0.295 | N | 0.468 | neutral | N | 0.516049864 | None | None | N |
H/Q | 0.2306 | likely_benign | 0.233 | benign | -0.433 | Destabilizing | 0.029 | N | 0.323 | neutral | N | 0.42094476 | None | None | N |
H/R | 0.0788 | likely_benign | 0.0763 | benign | -0.904 | Destabilizing | None | N | 0.105 | neutral | N | 0.417539095 | None | None | N |
H/S | 0.3789 | ambiguous | 0.4236 | ambiguous | -0.865 | Destabilizing | 0.072 | N | 0.399 | neutral | None | None | None | None | N |
H/T | 0.3869 | ambiguous | 0.4169 | ambiguous | -0.647 | Destabilizing | 0.072 | N | 0.431 | neutral | None | None | None | None | N |
H/V | 0.4083 | ambiguous | 0.4184 | ambiguous | -0.188 | Destabilizing | 0.072 | N | 0.479 | neutral | None | None | None | None | N |
H/W | 0.4954 | ambiguous | 0.5024 | ambiguous | 0.658 | Stabilizing | 0.864 | D | 0.456 | neutral | None | None | None | None | N |
H/Y | 0.1745 | likely_benign | 0.1796 | benign | 0.761 | Stabilizing | None | N | 0.107 | neutral | N | 0.468007988 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.