Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35000 | 105223;105224;105225 | chr2:178531617;178531616;178531615 | chr2:179396344;179396343;179396342 |
N2AB | 33359 | 100300;100301;100302 | chr2:178531617;178531616;178531615 | chr2:179396344;179396343;179396342 |
N2A | 32432 | 97519;97520;97521 | chr2:178531617;178531616;178531615 | chr2:179396344;179396343;179396342 |
N2B | 25935 | 78028;78029;78030 | chr2:178531617;178531616;178531615 | chr2:179396344;179396343;179396342 |
Novex-1 | 26060 | 78403;78404;78405 | chr2:178531617;178531616;178531615 | chr2:179396344;179396343;179396342 |
Novex-2 | 26127 | 78604;78605;78606 | chr2:178531617;178531616;178531615 | chr2:179396344;179396343;179396342 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs866303280 | None | 0.826 | N | 0.534 | 0.21 | 0.324986149311 | gnomAD-4.0.0 | 3.1818E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.4108E-04 | 0 | 0 | 3.02334E-05 |
E/G | None | None | 0.959 | D | 0.546 | 0.352 | 0.452264262256 | gnomAD-4.0.0 | 1.5909E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43271E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.5439 | ambiguous | 0.6442 | pathogenic | -0.971 | Destabilizing | 0.826 | D | 0.483 | neutral | N | 0.462082093 | None | None | N |
E/C | 0.9761 | likely_pathogenic | 0.987 | pathogenic | -0.687 | Destabilizing | 0.999 | D | 0.673 | neutral | None | None | None | None | N |
E/D | 0.3339 | likely_benign | 0.5248 | ambiguous | -1.467 | Destabilizing | 0.826 | D | 0.534 | neutral | N | 0.477494263 | None | None | N |
E/F | 0.9714 | likely_pathogenic | 0.9857 | pathogenic | -0.731 | Destabilizing | 0.997 | D | 0.663 | neutral | None | None | None | None | N |
E/G | 0.7287 | likely_pathogenic | 0.8315 | pathogenic | -1.359 | Destabilizing | 0.959 | D | 0.546 | neutral | D | 0.530019239 | None | None | N |
E/H | 0.8087 | likely_pathogenic | 0.8969 | pathogenic | -1.111 | Destabilizing | 0.991 | D | 0.517 | neutral | None | None | None | None | N |
E/I | 0.8202 | likely_pathogenic | 0.8847 | pathogenic | 0.102 | Stabilizing | 0.982 | D | 0.628 | neutral | None | None | None | None | N |
E/K | 0.6436 | likely_pathogenic | 0.7627 | pathogenic | -1.093 | Destabilizing | 0.852 | D | 0.558 | neutral | N | 0.456425557 | None | None | N |
E/L | 0.8606 | likely_pathogenic | 0.915 | pathogenic | 0.102 | Stabilizing | 0.939 | D | 0.558 | neutral | None | None | None | None | N |
E/M | 0.8456 | likely_pathogenic | 0.8895 | pathogenic | 0.644 | Stabilizing | 0.999 | D | 0.616 | neutral | None | None | None | None | N |
E/N | 0.6417 | likely_pathogenic | 0.7838 | pathogenic | -1.392 | Destabilizing | 0.969 | D | 0.501 | neutral | None | None | None | None | N |
E/P | 0.997 | likely_pathogenic | 0.9991 | pathogenic | -0.235 | Destabilizing | 0.997 | D | 0.537 | neutral | None | None | None | None | N |
E/Q | 0.3358 | likely_benign | 0.4012 | ambiguous | -1.206 | Destabilizing | 0.31 | N | 0.441 | neutral | N | 0.449134226 | None | None | N |
E/R | 0.7226 | likely_pathogenic | 0.8319 | pathogenic | -0.971 | Destabilizing | 0.939 | D | 0.495 | neutral | None | None | None | None | N |
E/S | 0.57 | likely_pathogenic | 0.6868 | pathogenic | -1.861 | Destabilizing | 0.759 | D | 0.525 | neutral | None | None | None | None | N |
E/T | 0.6295 | likely_pathogenic | 0.7368 | pathogenic | -1.527 | Destabilizing | 0.079 | N | 0.353 | neutral | None | None | None | None | N |
E/V | 0.6204 | likely_pathogenic | 0.7118 | pathogenic | -0.235 | Destabilizing | 0.92 | D | 0.547 | neutral | N | 0.457694994 | None | None | N |
E/W | 0.9863 | likely_pathogenic | 0.9943 | pathogenic | -0.703 | Destabilizing | 0.999 | D | 0.696 | prob.neutral | None | None | None | None | N |
E/Y | 0.9355 | likely_pathogenic | 0.9702 | pathogenic | -0.528 | Destabilizing | 0.997 | D | 0.613 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.