Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35015 | 105268;105269;105270 | chr2:178531572;178531571;178531570 | chr2:179396299;179396298;179396297 |
N2AB | 33374 | 100345;100346;100347 | chr2:178531572;178531571;178531570 | chr2:179396299;179396298;179396297 |
N2A | 32447 | 97564;97565;97566 | chr2:178531572;178531571;178531570 | chr2:179396299;179396298;179396297 |
N2B | 25950 | 78073;78074;78075 | chr2:178531572;178531571;178531570 | chr2:179396299;179396298;179396297 |
Novex-1 | 26075 | 78448;78449;78450 | chr2:178531572;178531571;178531570 | chr2:179396299;179396298;179396297 |
Novex-2 | 26142 | 78649;78650;78651 | chr2:178531572;178531571;178531570 | chr2:179396299;179396298;179396297 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.896 | D | 0.608 | 0.356 | 0.557481709393 | gnomAD-4.0.0 | 1.59091E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85755E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4183 | ambiguous | 0.6874 | pathogenic | -1.97 | Destabilizing | 0.896 | D | 0.608 | neutral | D | 0.532808828 | None | None | N |
V/C | 0.8947 | likely_pathogenic | 0.9441 | pathogenic | -1.501 | Destabilizing | 0.999 | D | 0.743 | deleterious | None | None | None | None | N |
V/D | 0.8179 | likely_pathogenic | 0.9539 | pathogenic | -2.576 | Highly Destabilizing | 0.996 | D | 0.829 | deleterious | None | None | None | None | N |
V/E | 0.5844 | likely_pathogenic | 0.7976 | pathogenic | -2.436 | Highly Destabilizing | 0.984 | D | 0.79 | deleterious | N | 0.466391835 | None | None | N |
V/F | 0.326 | likely_benign | 0.5729 | pathogenic | -1.235 | Destabilizing | 0.076 | N | 0.45 | neutral | None | None | None | None | N |
V/G | 0.6467 | likely_pathogenic | 0.8466 | pathogenic | -2.425 | Highly Destabilizing | 0.984 | D | 0.773 | deleterious | N | 0.493165202 | None | None | N |
V/H | 0.8105 | likely_pathogenic | 0.9269 | pathogenic | -2.117 | Highly Destabilizing | 0.999 | D | 0.802 | deleterious | None | None | None | None | N |
V/I | 0.0806 | likely_benign | 0.112 | benign | -0.732 | Destabilizing | 0.702 | D | 0.627 | neutral | None | None | None | None | N |
V/K | 0.6392 | likely_pathogenic | 0.8243 | pathogenic | -1.572 | Destabilizing | 0.976 | D | 0.766 | deleterious | None | None | None | None | N |
V/L | 0.2758 | likely_benign | 0.5095 | ambiguous | -0.732 | Destabilizing | 0.379 | N | 0.478 | neutral | N | 0.508547889 | None | None | N |
V/M | 0.1633 | likely_benign | 0.3292 | benign | -0.732 | Destabilizing | 0.437 | N | 0.429 | neutral | D | 0.533848978 | None | None | N |
V/N | 0.6221 | likely_pathogenic | 0.8682 | pathogenic | -1.707 | Destabilizing | 0.988 | D | 0.829 | deleterious | None | None | None | None | N |
V/P | 0.9932 | likely_pathogenic | 0.9976 | pathogenic | -1.116 | Destabilizing | 0.996 | D | 0.805 | deleterious | None | None | None | None | N |
V/Q | 0.564 | likely_pathogenic | 0.7535 | pathogenic | -1.691 | Destabilizing | 0.988 | D | 0.804 | deleterious | None | None | None | None | N |
V/R | 0.5892 | likely_pathogenic | 0.7714 | pathogenic | -1.256 | Destabilizing | 0.988 | D | 0.83 | deleterious | None | None | None | None | N |
V/S | 0.4545 | ambiguous | 0.7292 | pathogenic | -2.266 | Highly Destabilizing | 0.988 | D | 0.748 | deleterious | None | None | None | None | N |
V/T | 0.3116 | likely_benign | 0.5318 | ambiguous | -2.006 | Highly Destabilizing | 0.919 | D | 0.639 | neutral | None | None | None | None | N |
V/W | 0.9428 | likely_pathogenic | 0.9796 | pathogenic | -1.7 | Destabilizing | 0.999 | D | 0.801 | deleterious | None | None | None | None | N |
V/Y | 0.7903 | likely_pathogenic | 0.9073 | pathogenic | -1.357 | Destabilizing | 0.952 | D | 0.763 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.