Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35159 | 105700;105701;105702 | chr2:178531140;178531139;178531138 | chr2:179395867;179395866;179395865 |
N2AB | 33518 | 100777;100778;100779 | chr2:178531140;178531139;178531138 | chr2:179395867;179395866;179395865 |
N2A | 32591 | 97996;97997;97998 | chr2:178531140;178531139;178531138 | chr2:179395867;179395866;179395865 |
N2B | 26094 | 78505;78506;78507 | chr2:178531140;178531139;178531138 | chr2:179395867;179395866;179395865 |
Novex-1 | 26219 | 78880;78881;78882 | chr2:178531140;178531139;178531138 | chr2:179395867;179395866;179395865 |
Novex-2 | 26286 | 79081;79082;79083 | chr2:178531140;178531139;178531138 | chr2:179395867;179395866;179395865 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | rs1468368780 | -0.586 | 0.005 | D | 0.34 | 0.126 | 0.19670166235 | gnomAD-2.1.1 | 4.01E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.86E-06 | 0 |
T/N | rs1468368780 | -0.586 | 0.005 | D | 0.34 | 0.126 | 0.19670166235 | gnomAD-4.0.0 | 1.59087E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8575E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0771 | likely_benign | 0.0788 | benign | -0.514 | Destabilizing | 0.128 | N | 0.467 | neutral | N | 0.484073395 | None | None | I |
T/C | 0.4705 | ambiguous | 0.4725 | ambiguous | -0.41 | Destabilizing | 0.987 | D | 0.705 | prob.neutral | None | None | None | None | I |
T/D | 0.3307 | likely_benign | 0.3824 | ambiguous | -0.149 | Destabilizing | 0.32 | N | 0.623 | neutral | None | None | None | None | I |
T/E | 0.2562 | likely_benign | 0.2755 | benign | -0.182 | Destabilizing | 0.484 | N | 0.623 | neutral | None | None | None | None | I |
T/F | 0.2566 | likely_benign | 0.2876 | benign | -0.693 | Destabilizing | 0.953 | D | 0.799 | deleterious | None | None | None | None | I |
T/G | 0.2711 | likely_benign | 0.2948 | benign | -0.73 | Destabilizing | 0.32 | N | 0.596 | neutral | None | None | None | None | I |
T/H | 0.2359 | likely_benign | 0.2417 | benign | -1.008 | Destabilizing | 0.925 | D | 0.779 | deleterious | None | None | None | None | I |
T/I | 0.1693 | likely_benign | 0.1682 | benign | -0.046 | Destabilizing | 0.834 | D | 0.733 | prob.delet. | N | 0.498583252 | None | None | I |
T/K | 0.1709 | likely_benign | 0.1695 | benign | -0.702 | Destabilizing | 0.32 | N | 0.631 | neutral | None | None | None | None | I |
T/L | 0.1189 | likely_benign | 0.1198 | benign | -0.046 | Destabilizing | 0.484 | N | 0.615 | neutral | None | None | None | None | I |
T/M | 0.1121 | likely_benign | 0.1109 | benign | 0.077 | Stabilizing | 0.987 | D | 0.703 | prob.neutral | None | None | None | None | I |
T/N | 0.1162 | likely_benign | 0.1289 | benign | -0.556 | Destabilizing | 0.005 | N | 0.34 | neutral | D | 0.533443546 | None | None | I |
T/P | 0.3206 | likely_benign | 0.4067 | ambiguous | -0.17 | Destabilizing | 0.834 | D | 0.733 | prob.delet. | D | 0.523942436 | None | None | I |
T/Q | 0.2158 | likely_benign | 0.2146 | benign | -0.732 | Destabilizing | 0.767 | D | 0.738 | prob.delet. | None | None | None | None | I |
T/R | 0.1344 | likely_benign | 0.138 | benign | -0.421 | Destabilizing | 0.767 | D | 0.726 | prob.delet. | None | None | None | None | I |
T/S | 0.1042 | likely_benign | 0.1114 | benign | -0.76 | Destabilizing | 0.027 | N | 0.37 | neutral | N | 0.504176645 | None | None | I |
T/V | 0.1359 | likely_benign | 0.1287 | benign | -0.17 | Destabilizing | 0.656 | D | 0.521 | neutral | None | None | None | None | I |
T/W | 0.6033 | likely_pathogenic | 0.6583 | pathogenic | -0.68 | Destabilizing | 0.987 | D | 0.739 | prob.delet. | None | None | None | None | I |
T/Y | 0.3003 | likely_benign | 0.3339 | benign | -0.438 | Destabilizing | 0.953 | D | 0.8 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.