Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35165 | 105718;105719;105720 | chr2:178531122;178531121;178531120 | chr2:179395849;179395848;179395847 |
N2AB | 33524 | 100795;100796;100797 | chr2:178531122;178531121;178531120 | chr2:179395849;179395848;179395847 |
N2A | 32597 | 98014;98015;98016 | chr2:178531122;178531121;178531120 | chr2:179395849;179395848;179395847 |
N2B | 26100 | 78523;78524;78525 | chr2:178531122;178531121;178531120 | chr2:179395849;179395848;179395847 |
Novex-1 | 26225 | 78898;78899;78900 | chr2:178531122;178531121;178531120 | chr2:179395849;179395848;179395847 |
Novex-2 | 26292 | 79099;79100;79101 | chr2:178531122;178531121;178531120 | chr2:179395849;179395848;179395847 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs879156291 | None | None | N | 0.113 | 0.073 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/E | rs879156291 | None | None | N | 0.113 | 0.073 | None | gnomAD-4.0.0 | 2.02984E-06 | None | None | None | None | N | None | 3.49504E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/T | None | None | None | N | 0.233 | 0.043 | 0.0846915920261 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.1275 | likely_benign | 0.1215 | benign | 0.097 | Stabilizing | None | N | 0.191 | neutral | None | None | None | None | N |
K/C | 0.4179 | ambiguous | 0.4051 | ambiguous | -0.238 | Destabilizing | 0.017 | N | 0.462 | neutral | None | None | None | None | N |
K/D | 0.15 | likely_benign | 0.1364 | benign | -0.005 | Destabilizing | None | N | 0.224 | neutral | None | None | None | None | N |
K/E | 0.0854 | likely_benign | 0.0839 | benign | -0.005 | Destabilizing | None | N | 0.113 | neutral | N | 0.394485224 | None | None | N |
K/F | 0.6184 | likely_pathogenic | 0.6041 | pathogenic | -0.152 | Destabilizing | 0.003 | N | 0.462 | neutral | None | None | None | None | N |
K/G | 0.0662 | likely_benign | 0.0638 | benign | -0.079 | Destabilizing | None | N | 0.195 | neutral | None | None | None | None | N |
K/H | 0.2023 | likely_benign | 0.1832 | benign | -0.29 | Destabilizing | None | N | 0.18 | neutral | None | None | None | None | N |
K/I | 0.3535 | ambiguous | 0.3289 | benign | 0.478 | Stabilizing | None | N | 0.432 | neutral | N | 0.457996292 | None | None | N |
K/L | 0.2485 | likely_benign | 0.2534 | benign | 0.478 | Stabilizing | None | N | 0.236 | neutral | None | None | None | None | N |
K/M | 0.1955 | likely_benign | 0.2022 | benign | 0.172 | Stabilizing | 0.017 | N | 0.448 | neutral | None | None | None | None | N |
K/N | 0.1101 | likely_benign | 0.1057 | benign | 0.232 | Stabilizing | None | N | 0.167 | neutral | N | 0.373355017 | None | None | N |
K/P | 0.4842 | ambiguous | 0.4832 | ambiguous | 0.378 | Stabilizing | 0.001 | N | 0.311 | neutral | None | None | None | None | N |
K/Q | 0.0926 | likely_benign | 0.0856 | benign | 0.072 | Stabilizing | None | N | 0.191 | neutral | N | 0.443105891 | None | None | N |
K/R | 0.0813 | likely_benign | 0.0748 | benign | 0.004 | Stabilizing | None | N | 0.117 | neutral | N | 0.448762427 | None | None | N |
K/S | 0.1207 | likely_benign | 0.1117 | benign | -0.205 | Destabilizing | None | N | 0.153 | neutral | None | None | None | None | N |
K/T | 0.1276 | likely_benign | 0.1246 | benign | -0.067 | Destabilizing | None | N | 0.233 | neutral | N | 0.487723459 | None | None | N |
K/V | 0.2873 | likely_benign | 0.2656 | benign | 0.378 | Stabilizing | None | N | 0.231 | neutral | None | None | None | None | N |
K/W | 0.5345 | ambiguous | 0.5055 | ambiguous | -0.208 | Destabilizing | 0.152 | N | 0.411 | neutral | None | None | None | None | N |
K/Y | 0.398 | ambiguous | 0.3697 | ambiguous | 0.156 | Stabilizing | 0.001 | N | 0.407 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.