Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35175 | 105748;105749;105750 | chr2:178531092;178531091;178531090 | chr2:179395819;179395818;179395817 |
N2AB | 33534 | 100825;100826;100827 | chr2:178531092;178531091;178531090 | chr2:179395819;179395818;179395817 |
N2A | 32607 | 98044;98045;98046 | chr2:178531092;178531091;178531090 | chr2:179395819;179395818;179395817 |
N2B | 26110 | 78553;78554;78555 | chr2:178531092;178531091;178531090 | chr2:179395819;179395818;179395817 |
Novex-1 | 26235 | 78928;78929;78930 | chr2:178531092;178531091;178531090 | chr2:179395819;179395818;179395817 |
Novex-2 | 26302 | 79129;79130;79131 | chr2:178531092;178531091;178531090 | chr2:179395819;179395818;179395817 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Q | rs1215297501 | None | 0.938 | N | 0.587 | 0.225 | 0.241078983079 | gnomAD-4.0.0 | 3.18173E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71497E-06 | 0 | 0 |
H/Y | None | None | 0.001 | N | 0.156 | 0.099 | 0.188950314367 | gnomAD-4.0.0 | 1.59087E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02334E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.6415 | likely_pathogenic | 0.6004 | pathogenic | -1.55 | Destabilizing | 0.276 | N | 0.493 | neutral | None | None | None | None | N |
H/C | 0.2554 | likely_benign | 0.2156 | benign | -1.093 | Destabilizing | 0.987 | D | 0.649 | neutral | None | None | None | None | N |
H/D | 0.5813 | likely_pathogenic | 0.5733 | pathogenic | -0.938 | Destabilizing | 0.812 | D | 0.616 | neutral | D | 0.527960369 | None | None | N |
H/E | 0.5041 | ambiguous | 0.4963 | ambiguous | -0.787 | Destabilizing | 0.652 | D | 0.467 | neutral | None | None | None | None | N |
H/F | 0.3607 | ambiguous | 0.3265 | benign | -0.246 | Destabilizing | 0.003 | N | 0.341 | neutral | None | None | None | None | N |
H/G | 0.6581 | likely_pathogenic | 0.5934 | pathogenic | -1.95 | Destabilizing | 0.652 | D | 0.582 | neutral | None | None | None | None | N |
H/I | 0.5115 | ambiguous | 0.4578 | ambiguous | -0.403 | Destabilizing | 0.005 | N | 0.455 | neutral | None | None | None | None | N |
H/K | 0.4965 | ambiguous | 0.4657 | ambiguous | -1.141 | Destabilizing | 0.652 | D | 0.57 | neutral | None | None | None | None | N |
H/L | 0.196 | likely_benign | 0.1724 | benign | -0.403 | Destabilizing | 0.059 | N | 0.504 | neutral | N | 0.456230769 | None | None | N |
H/M | 0.6607 | likely_pathogenic | 0.6214 | pathogenic | -0.685 | Destabilizing | 0.868 | D | 0.659 | neutral | None | None | None | None | N |
H/N | 0.2436 | likely_benign | 0.2283 | benign | -1.442 | Destabilizing | 0.586 | D | 0.518 | neutral | D | 0.535598417 | None | None | N |
H/P | 0.7105 | likely_pathogenic | 0.6875 | pathogenic | -0.77 | Destabilizing | 0.938 | D | 0.686 | prob.neutral | D | 0.535771775 | None | None | N |
H/Q | 0.2838 | likely_benign | 0.2748 | benign | -1.134 | Destabilizing | 0.938 | D | 0.587 | neutral | N | 0.512702915 | None | None | N |
H/R | 0.2095 | likely_benign | 0.1881 | benign | -1.315 | Destabilizing | 0.586 | D | 0.549 | neutral | N | 0.478320982 | None | None | N |
H/S | 0.4694 | ambiguous | 0.4392 | ambiguous | -1.736 | Destabilizing | 0.652 | D | 0.552 | neutral | None | None | None | None | N |
H/T | 0.5635 | ambiguous | 0.4979 | ambiguous | -1.462 | Destabilizing | 0.481 | N | 0.585 | neutral | None | None | None | None | N |
H/V | 0.4697 | ambiguous | 0.4106 | ambiguous | -0.77 | Destabilizing | 0.002 | N | 0.424 | neutral | None | None | None | None | N |
H/W | 0.4101 | ambiguous | 0.3709 | ambiguous | 0.245 | Stabilizing | 0.961 | D | 0.625 | neutral | None | None | None | None | N |
H/Y | 0.1024 | likely_benign | 0.0867 | benign | 0.275 | Stabilizing | 0.001 | N | 0.156 | neutral | N | 0.43793301 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.