Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35189 | 105790;105791;105792 | chr2:178531050;178531049;178531048 | chr2:179395777;179395776;179395775 |
N2AB | 33548 | 100867;100868;100869 | chr2:178531050;178531049;178531048 | chr2:179395777;179395776;179395775 |
N2A | 32621 | 98086;98087;98088 | chr2:178531050;178531049;178531048 | chr2:179395777;179395776;179395775 |
N2B | 26124 | 78595;78596;78597 | chr2:178531050;178531049;178531048 | chr2:179395777;179395776;179395775 |
Novex-1 | 26249 | 78970;78971;78972 | chr2:178531050;178531049;178531048 | chr2:179395777;179395776;179395775 |
Novex-2 | 26316 | 79171;79172;79173 | chr2:178531050;178531049;178531048 | chr2:179395777;179395776;179395775 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | None | None | None | N | 0.245 | 0.32 | 0.341934017632 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0811 | likely_benign | 0.0865 | benign | -0.706 | Destabilizing | 0.012 | N | 0.262 | neutral | D | 0.528133727 | None | None | N |
S/C | 0.1632 | likely_benign | 0.1384 | benign | -0.537 | Destabilizing | None | N | 0.245 | neutral | N | 0.507688286 | None | None | N |
S/D | 0.387 | ambiguous | 0.4775 | ambiguous | -0.4 | Destabilizing | 0.038 | N | 0.281 | neutral | None | None | None | None | N |
S/E | 0.5036 | ambiguous | 0.5745 | pathogenic | -0.452 | Destabilizing | 0.038 | N | 0.287 | neutral | None | None | None | None | N |
S/F | 0.1467 | likely_benign | 0.161 | benign | -1.171 | Destabilizing | None | N | 0.314 | neutral | N | 0.487760379 | None | None | N |
S/G | 0.1229 | likely_benign | 0.1264 | benign | -0.87 | Destabilizing | 0.031 | N | 0.298 | neutral | None | None | None | None | N |
S/H | 0.3074 | likely_benign | 0.324 | benign | -1.378 | Destabilizing | 0.356 | N | 0.44 | neutral | None | None | None | None | N |
S/I | 0.1779 | likely_benign | 0.2062 | benign | -0.387 | Destabilizing | 0.038 | N | 0.483 | neutral | None | None | None | None | N |
S/K | 0.5966 | likely_pathogenic | 0.6604 | pathogenic | -0.61 | Destabilizing | 0.038 | N | 0.28 | neutral | None | None | None | None | N |
S/L | 0.1058 | likely_benign | 0.1134 | benign | -0.387 | Destabilizing | 0.016 | N | 0.476 | neutral | None | None | None | None | N |
S/M | 0.2612 | likely_benign | 0.2761 | benign | 0.067 | Stabilizing | 0.356 | N | 0.439 | neutral | None | None | None | None | N |
S/N | 0.1578 | likely_benign | 0.1786 | benign | -0.492 | Destabilizing | 0.001 | N | 0.13 | neutral | None | None | None | None | N |
S/P | 0.1275 | likely_benign | 0.1872 | benign | -0.464 | Destabilizing | 0.295 | N | 0.435 | neutral | N | 0.505566299 | None | None | N |
S/Q | 0.4576 | ambiguous | 0.5043 | ambiguous | -0.821 | Destabilizing | 0.003 | N | 0.202 | neutral | None | None | None | None | N |
S/R | 0.4455 | ambiguous | 0.4943 | ambiguous | -0.357 | Destabilizing | 0.072 | N | 0.429 | neutral | None | None | None | None | N |
S/T | 0.0852 | likely_benign | 0.0913 | benign | -0.577 | Destabilizing | None | N | 0.107 | neutral | N | 0.503083354 | None | None | N |
S/V | 0.1918 | likely_benign | 0.2152 | benign | -0.464 | Destabilizing | 0.038 | N | 0.515 | neutral | None | None | None | None | N |
S/W | 0.2939 | likely_benign | 0.2954 | benign | -1.09 | Destabilizing | 0.676 | D | 0.517 | neutral | None | None | None | None | N |
S/Y | 0.1657 | likely_benign | 0.1682 | benign | -0.828 | Destabilizing | 0.093 | N | 0.509 | neutral | D | 0.534657055 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.