Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35202 | 105829;105830;105831 | chr2:178531011;178531010;178531009 | chr2:179395738;179395737;179395736 |
N2AB | 33561 | 100906;100907;100908 | chr2:178531011;178531010;178531009 | chr2:179395738;179395737;179395736 |
N2A | 32634 | 98125;98126;98127 | chr2:178531011;178531010;178531009 | chr2:179395738;179395737;179395736 |
N2B | 26137 | 78634;78635;78636 | chr2:178531011;178531010;178531009 | chr2:179395738;179395737;179395736 |
Novex-1 | 26262 | 79009;79010;79011 | chr2:178531011;178531010;178531009 | chr2:179395738;179395737;179395736 |
Novex-2 | 26329 | 79210;79211;79212 | chr2:178531011;178531010;178531009 | chr2:179395738;179395737;179395736 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | None | None | 0.969 | N | 0.808 | 0.326 | 0.637791279193 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1854 | likely_benign | 0.2122 | benign | -1.965 | Destabilizing | 0.899 | D | 0.62 | neutral | N | 0.500215867 | None | None | N |
V/C | 0.8194 | likely_pathogenic | 0.8423 | pathogenic | -1.568 | Destabilizing | 0.999 | D | 0.829 | deleterious | None | None | None | None | N |
V/D | 0.5897 | likely_pathogenic | 0.6197 | pathogenic | -2.354 | Highly Destabilizing | 0.996 | D | 0.87 | deleterious | None | None | None | None | N |
V/E | 0.316 | likely_benign | 0.3517 | ambiguous | -2.262 | Highly Destabilizing | 0.984 | D | 0.818 | deleterious | D | 0.530229883 | None | None | N |
V/F | 0.2134 | likely_benign | 0.2287 | benign | -1.247 | Destabilizing | 0.976 | D | 0.832 | deleterious | None | None | None | None | N |
V/G | 0.4025 | ambiguous | 0.4432 | ambiguous | -2.361 | Highly Destabilizing | 0.984 | D | 0.826 | deleterious | D | 0.530690386 | None | None | N |
V/H | 0.6027 | likely_pathogenic | 0.6178 | pathogenic | -1.833 | Destabilizing | 0.999 | D | 0.857 | deleterious | None | None | None | None | N |
V/I | 0.0853 | likely_benign | 0.0838 | benign | -0.917 | Destabilizing | 0.709 | D | 0.596 | neutral | None | None | None | None | N |
V/K | 0.3205 | likely_benign | 0.3394 | benign | -1.641 | Destabilizing | 0.988 | D | 0.819 | deleterious | None | None | None | None | N |
V/L | 0.1803 | likely_benign | 0.1898 | benign | -0.917 | Destabilizing | 0.027 | N | 0.356 | neutral | N | 0.505046224 | None | None | N |
V/M | 0.139 | likely_benign | 0.147 | benign | -0.951 | Destabilizing | 0.969 | D | 0.808 | deleterious | N | 0.489722162 | None | None | N |
V/N | 0.476 | ambiguous | 0.4687 | ambiguous | -1.665 | Destabilizing | 0.996 | D | 0.871 | deleterious | None | None | None | None | N |
V/P | 0.9752 | likely_pathogenic | 0.9797 | pathogenic | -1.237 | Destabilizing | 0.996 | D | 0.849 | deleterious | None | None | None | None | N |
V/Q | 0.3263 | likely_benign | 0.3392 | benign | -1.745 | Destabilizing | 0.996 | D | 0.857 | deleterious | None | None | None | None | N |
V/R | 0.2525 | likely_benign | 0.2803 | benign | -1.182 | Destabilizing | 0.988 | D | 0.877 | deleterious | None | None | None | None | N |
V/S | 0.2816 | likely_benign | 0.297 | benign | -2.22 | Highly Destabilizing | 0.988 | D | 0.809 | deleterious | None | None | None | None | N |
V/T | 0.1646 | likely_benign | 0.1765 | benign | -2.021 | Highly Destabilizing | 0.922 | D | 0.637 | neutral | None | None | None | None | N |
V/W | 0.7835 | likely_pathogenic | 0.8264 | pathogenic | -1.549 | Destabilizing | 0.999 | D | 0.829 | deleterious | None | None | None | None | N |
V/Y | 0.6398 | likely_pathogenic | 0.6633 | pathogenic | -1.264 | Destabilizing | 0.988 | D | 0.849 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.