Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35288 | 106087;106088;106089 | chr2:178530753;178530752;178530751 | chr2:179395480;179395479;179395478 |
N2AB | 33647 | 101164;101165;101166 | chr2:178530753;178530752;178530751 | chr2:179395480;179395479;179395478 |
N2A | 32720 | 98383;98384;98385 | chr2:178530753;178530752;178530751 | chr2:179395480;179395479;179395478 |
N2B | 26223 | 78892;78893;78894 | chr2:178530753;178530752;178530751 | chr2:179395480;179395479;179395478 |
Novex-1 | 26348 | 79267;79268;79269 | chr2:178530753;178530752;178530751 | chr2:179395480;179395479;179395478 |
Novex-2 | 26415 | 79468;79469;79470 | chr2:178530753;178530752;178530751 | chr2:179395480;179395479;179395478 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs764713884 | -2.351 | 0.322 | N | 0.495 | 0.25 | 0.45553875121 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.77E-05 | 0 |
I/T | rs764713884 | -2.351 | 0.322 | N | 0.495 | 0.25 | 0.45553875121 | gnomAD-4.0.0 | 6.8415E-06 | None | None | None | None | N | None | 2.98704E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.09462E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7773 | likely_pathogenic | 0.7911 | pathogenic | -1.832 | Destabilizing | 0.115 | N | 0.433 | neutral | None | None | None | None | N |
I/C | 0.8958 | likely_pathogenic | 0.9174 | pathogenic | -1.066 | Destabilizing | 0.981 | D | 0.547 | neutral | None | None | None | None | N |
I/D | 0.9386 | likely_pathogenic | 0.9403 | pathogenic | -1.238 | Destabilizing | 0.817 | D | 0.605 | neutral | None | None | None | None | N |
I/E | 0.8869 | likely_pathogenic | 0.8857 | pathogenic | -1.147 | Destabilizing | 0.817 | D | 0.604 | neutral | None | None | None | None | N |
I/F | 0.2435 | likely_benign | 0.2936 | benign | -1.076 | Destabilizing | 0.624 | D | 0.531 | neutral | N | 0.403344276 | None | None | N |
I/G | 0.9155 | likely_pathogenic | 0.9213 | pathogenic | -2.251 | Highly Destabilizing | 0.001 | N | 0.437 | neutral | None | None | None | None | N |
I/H | 0.8675 | likely_pathogenic | 0.8822 | pathogenic | -1.533 | Destabilizing | 0.981 | D | 0.619 | neutral | None | None | None | None | N |
I/K | 0.7899 | likely_pathogenic | 0.8076 | pathogenic | -1.217 | Destabilizing | 0.817 | D | 0.607 | neutral | None | None | None | None | N |
I/L | 0.2021 | likely_benign | 0.2202 | benign | -0.705 | Destabilizing | 0.041 | N | 0.359 | neutral | N | 0.493888923 | None | None | N |
I/M | 0.1382 | likely_benign | 0.1478 | benign | -0.579 | Destabilizing | 0.624 | D | 0.527 | neutral | N | 0.467833844 | None | None | N |
I/N | 0.6017 | likely_pathogenic | 0.5969 | pathogenic | -1.15 | Destabilizing | 0.771 | D | 0.615 | neutral | N | 0.468594312 | None | None | N |
I/P | 0.844 | likely_pathogenic | 0.884 | pathogenic | -1.051 | Destabilizing | 0.932 | D | 0.619 | neutral | None | None | None | None | N |
I/Q | 0.8218 | likely_pathogenic | 0.8395 | pathogenic | -1.195 | Destabilizing | 0.932 | D | 0.612 | neutral | None | None | None | None | N |
I/R | 0.7275 | likely_pathogenic | 0.7533 | pathogenic | -0.792 | Destabilizing | 0.817 | D | 0.62 | neutral | None | None | None | None | N |
I/S | 0.7566 | likely_pathogenic | 0.7635 | pathogenic | -1.861 | Destabilizing | 0.322 | N | 0.539 | neutral | N | 0.468087333 | None | None | N |
I/T | 0.7515 | likely_pathogenic | 0.7635 | pathogenic | -1.641 | Destabilizing | 0.322 | N | 0.495 | neutral | N | 0.456477538 | None | None | N |
I/V | 0.1647 | likely_benign | 0.1738 | benign | -1.051 | Destabilizing | 0.001 | N | 0.232 | neutral | N | 0.481108839 | None | None | N |
I/W | 0.8866 | likely_pathogenic | 0.912 | pathogenic | -1.264 | Destabilizing | 0.981 | D | 0.651 | neutral | None | None | None | None | N |
I/Y | 0.687 | likely_pathogenic | 0.7116 | pathogenic | -0.998 | Destabilizing | 0.817 | D | 0.557 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.