Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35296 | 106111;106112;106113 | chr2:178530729;178530728;178530727 | chr2:179395456;179395455;179395454 |
N2AB | 33655 | 101188;101189;101190 | chr2:178530729;178530728;178530727 | chr2:179395456;179395455;179395454 |
N2A | 32728 | 98407;98408;98409 | chr2:178530729;178530728;178530727 | chr2:179395456;179395455;179395454 |
N2B | 26231 | 78916;78917;78918 | chr2:178530729;178530728;178530727 | chr2:179395456;179395455;179395454 |
Novex-1 | 26356 | 79291;79292;79293 | chr2:178530729;178530728;178530727 | chr2:179395456;179395455;179395454 |
Novex-2 | 26423 | 79492;79493;79494 | chr2:178530729;178530728;178530727 | chr2:179395456;179395455;179395454 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.626 | N | 0.422 | 0.218 | 0.12205267543 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6584 | likely_pathogenic | 0.6904 | pathogenic | -0.709 | Destabilizing | 0.997 | D | 0.456 | neutral | None | None | None | None | N |
A/D | 0.5394 | ambiguous | 0.4901 | ambiguous | -0.553 | Destabilizing | 0.922 | D | 0.487 | neutral | N | 0.474609729 | None | None | N |
A/E | 0.4927 | ambiguous | 0.4465 | ambiguous | -0.719 | Destabilizing | 0.816 | D | 0.41 | neutral | None | None | None | None | N |
A/F | 0.41 | ambiguous | 0.4071 | ambiguous | -0.929 | Destabilizing | 0.969 | D | 0.606 | neutral | None | None | None | None | N |
A/G | 0.1952 | likely_benign | 0.1972 | benign | -0.236 | Destabilizing | 0.409 | N | 0.457 | neutral | N | 0.499468101 | None | None | N |
A/H | 0.7346 | likely_pathogenic | 0.7284 | pathogenic | -0.326 | Destabilizing | 0.997 | D | 0.612 | neutral | None | None | None | None | N |
A/I | 0.3023 | likely_benign | 0.3058 | benign | -0.35 | Destabilizing | 0.94 | D | 0.443 | neutral | None | None | None | None | N |
A/K | 0.7254 | likely_pathogenic | 0.7077 | pathogenic | -0.579 | Destabilizing | 0.816 | D | 0.401 | neutral | None | None | None | None | N |
A/L | 0.3129 | likely_benign | 0.3014 | benign | -0.35 | Destabilizing | 0.69 | D | 0.41 | neutral | None | None | None | None | N |
A/M | 0.3706 | ambiguous | 0.3709 | ambiguous | -0.372 | Destabilizing | 0.997 | D | 0.499 | neutral | None | None | None | None | N |
A/N | 0.4634 | ambiguous | 0.4344 | ambiguous | -0.23 | Destabilizing | 0.94 | D | 0.501 | neutral | None | None | None | None | N |
A/P | 0.5481 | ambiguous | 0.4108 | ambiguous | -0.274 | Destabilizing | 0.96 | D | 0.478 | neutral | N | 0.454754531 | None | None | N |
A/Q | 0.6227 | likely_pathogenic | 0.6114 | pathogenic | -0.536 | Destabilizing | 0.969 | D | 0.479 | neutral | None | None | None | None | N |
A/R | 0.6604 | likely_pathogenic | 0.6437 | pathogenic | -0.11 | Destabilizing | 0.94 | D | 0.483 | neutral | None | None | None | None | N |
A/S | 0.1436 | likely_benign | 0.144 | benign | -0.388 | Destabilizing | 0.019 | N | 0.213 | neutral | N | 0.470355915 | None | None | N |
A/T | 0.1286 | likely_benign | 0.1328 | benign | -0.483 | Destabilizing | 0.043 | N | 0.284 | neutral | N | 0.413809199 | None | None | N |
A/V | 0.1675 | likely_benign | 0.1708 | benign | -0.274 | Destabilizing | 0.626 | D | 0.422 | neutral | N | 0.414675991 | None | None | N |
A/W | 0.8559 | likely_pathogenic | 0.8479 | pathogenic | -1.057 | Destabilizing | 0.997 | D | 0.679 | prob.neutral | None | None | None | None | N |
A/Y | 0.5964 | likely_pathogenic | 0.5885 | pathogenic | -0.71 | Destabilizing | 0.99 | D | 0.608 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.