Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35313 | 106162;106163;106164 | chr2:178530678;178530677;178530676 | chr2:179395405;179395404;179395403 |
N2AB | 33672 | 101239;101240;101241 | chr2:178530678;178530677;178530676 | chr2:179395405;179395404;179395403 |
N2A | 32745 | 98458;98459;98460 | chr2:178530678;178530677;178530676 | chr2:179395405;179395404;179395403 |
N2B | 26248 | 78967;78968;78969 | chr2:178530678;178530677;178530676 | chr2:179395405;179395404;179395403 |
Novex-1 | 26373 | 79342;79343;79344 | chr2:178530678;178530677;178530676 | chr2:179395405;179395404;179395403 |
Novex-2 | 26440 | 79543;79544;79545 | chr2:178530678;178530677;178530676 | chr2:179395405;179395404;179395403 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | None | None | 0.001 | N | 0.187 | 0.092 | 0.208000267992 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
R/S | rs1688720188 | None | None | N | 0.097 | 0.1 | 0.0716867268079 | gnomAD-4.0.0 | 6.84136E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99392E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.0932 | likely_benign | 0.0965 | benign | 0.151 | Stabilizing | 0.002 | N | 0.169 | neutral | None | None | None | None | I |
R/C | 0.0503 | likely_benign | 0.0532 | benign | -0.01 | Destabilizing | None | N | 0.121 | neutral | None | None | None | None | I |
R/D | 0.1702 | likely_benign | 0.187 | benign | -0.1 | Destabilizing | 0.004 | N | 0.275 | neutral | None | None | None | None | I |
R/E | 0.1642 | likely_benign | 0.168 | benign | -0.035 | Destabilizing | 0.004 | N | 0.263 | neutral | None | None | None | None | I |
R/F | 0.1794 | likely_benign | 0.1954 | benign | -0.043 | Destabilizing | 0.085 | N | 0.47 | neutral | None | None | None | None | I |
R/G | 0.063 | likely_benign | 0.063 | benign | -0.042 | Destabilizing | 0.001 | N | 0.187 | neutral | N | 0.441050673 | None | None | I |
R/H | 0.0663 | likely_benign | 0.0664 | benign | -0.573 | Destabilizing | 0.245 | N | 0.4 | neutral | None | None | None | None | I |
R/I | 0.1211 | likely_benign | 0.1163 | benign | 0.623 | Stabilizing | 0.018 | N | 0.327 | neutral | None | None | None | None | I |
R/K | 0.1059 | likely_benign | 0.1015 | benign | 0.066 | Stabilizing | 0.003 | N | 0.221 | neutral | N | 0.450728949 | None | None | I |
R/L | 0.0983 | likely_benign | 0.0976 | benign | 0.623 | Stabilizing | 0.004 | N | 0.221 | neutral | None | None | None | None | I |
R/M | 0.1498 | likely_benign | 0.1409 | benign | 0.112 | Stabilizing | 0.427 | N | 0.386 | neutral | N | 0.495655949 | None | None | I |
R/N | 0.1287 | likely_benign | 0.1338 | benign | 0.262 | Stabilizing | None | N | 0.084 | neutral | None | None | None | None | I |
R/P | 0.1518 | likely_benign | 0.1749 | benign | 0.486 | Stabilizing | 0.018 | N | 0.345 | neutral | None | None | None | None | I |
R/Q | 0.0793 | likely_benign | 0.0792 | benign | 0.197 | Stabilizing | 0.018 | N | 0.352 | neutral | None | None | None | None | I |
R/S | 0.0799 | likely_benign | 0.0817 | benign | 0.003 | Stabilizing | None | N | 0.097 | neutral | N | 0.405380662 | None | None | I |
R/T | 0.0801 | likely_benign | 0.078 | benign | 0.197 | Stabilizing | 0.001 | N | 0.199 | neutral | N | 0.44692064 | None | None | I |
R/V | 0.1461 | likely_benign | 0.1474 | benign | 0.486 | Stabilizing | 0.009 | N | 0.301 | neutral | None | None | None | None | I |
R/W | 0.125 | likely_benign | 0.1259 | benign | -0.147 | Destabilizing | 0.737 | D | 0.329 | neutral | N | 0.476974188 | None | None | I |
R/Y | 0.1186 | likely_benign | 0.1249 | benign | 0.265 | Stabilizing | 0.085 | N | 0.453 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.