Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35317 | 106174;106175;106176 | chr2:178530666;178530665;178530664 | chr2:179395393;179395392;179395391 |
N2AB | 33676 | 101251;101252;101253 | chr2:178530666;178530665;178530664 | chr2:179395393;179395392;179395391 |
N2A | 32749 | 98470;98471;98472 | chr2:178530666;178530665;178530664 | chr2:179395393;179395392;179395391 |
N2B | 26252 | 78979;78980;78981 | chr2:178530666;178530665;178530664 | chr2:179395393;179395392;179395391 |
Novex-1 | 26377 | 79354;79355;79356 | chr2:178530666;178530665;178530664 | chr2:179395393;179395392;179395391 |
Novex-2 | 26444 | 79555;79556;79557 | chr2:178530666;178530665;178530664 | chr2:179395393;179395392;179395391 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs765504674 | -1.815 | 0.003 | D | 0.412 | 0.647 | 0.636883013597 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.86E-06 | 0 |
V/A | rs765504674 | -1.815 | 0.003 | D | 0.412 | 0.647 | 0.636883013597 | gnomAD-4.0.0 | 1.59086E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85747E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5085 | ambiguous | 0.507 | ambiguous | -1.64 | Destabilizing | 0.003 | N | 0.412 | neutral | D | 0.565031179 | None | None | N |
V/C | 0.9322 | likely_pathogenic | 0.9317 | pathogenic | -1.299 | Destabilizing | 0.955 | D | 0.699 | prob.neutral | None | None | None | None | N |
V/D | 0.9036 | likely_pathogenic | 0.9185 | pathogenic | -1.26 | Destabilizing | 0.582 | D | 0.839 | deleterious | D | 0.611080143 | None | None | N |
V/E | 0.8551 | likely_pathogenic | 0.8692 | pathogenic | -1.169 | Destabilizing | 0.648 | D | 0.822 | deleterious | None | None | None | None | N |
V/F | 0.494 | ambiguous | 0.5252 | ambiguous | -1.107 | Destabilizing | 0.407 | N | 0.734 | prob.delet. | D | 0.535112299 | None | None | N |
V/G | 0.6001 | likely_pathogenic | 0.5973 | pathogenic | -2.052 | Highly Destabilizing | 0.407 | N | 0.799 | deleterious | D | 0.585542031 | None | None | N |
V/H | 0.9659 | likely_pathogenic | 0.97 | pathogenic | -1.543 | Destabilizing | 0.955 | D | 0.804 | deleterious | None | None | None | None | N |
V/I | 0.1015 | likely_benign | 0.1015 | benign | -0.57 | Destabilizing | 0.001 | N | 0.319 | neutral | N | 0.46830435 | None | None | N |
V/K | 0.9006 | likely_pathogenic | 0.9114 | pathogenic | -1.289 | Destabilizing | 0.648 | D | 0.824 | deleterious | None | None | None | None | N |
V/L | 0.5366 | ambiguous | 0.542 | ambiguous | -0.57 | Destabilizing | 0.014 | N | 0.649 | neutral | D | 0.532074517 | None | None | N |
V/M | 0.3807 | ambiguous | 0.3733 | ambiguous | -0.603 | Destabilizing | 0.476 | N | 0.685 | prob.neutral | None | None | None | None | N |
V/N | 0.8361 | likely_pathogenic | 0.8584 | pathogenic | -1.239 | Destabilizing | 0.849 | D | 0.833 | deleterious | None | None | None | None | N |
V/P | 0.9075 | likely_pathogenic | 0.9146 | pathogenic | -0.893 | Destabilizing | 0.849 | D | 0.825 | deleterious | None | None | None | None | N |
V/Q | 0.8961 | likely_pathogenic | 0.9088 | pathogenic | -1.251 | Destabilizing | 0.849 | D | 0.821 | deleterious | None | None | None | None | N |
V/R | 0.8831 | likely_pathogenic | 0.8986 | pathogenic | -0.946 | Destabilizing | 0.648 | D | 0.825 | deleterious | None | None | None | None | N |
V/S | 0.762 | likely_pathogenic | 0.7762 | pathogenic | -1.89 | Destabilizing | 0.313 | N | 0.804 | deleterious | None | None | None | None | N |
V/T | 0.6082 | likely_pathogenic | 0.6237 | pathogenic | -1.655 | Destabilizing | 0.206 | N | 0.689 | prob.neutral | None | None | None | None | N |
V/W | 0.9711 | likely_pathogenic | 0.9718 | pathogenic | -1.332 | Destabilizing | 0.955 | D | 0.778 | deleterious | None | None | None | None | N |
V/Y | 0.8933 | likely_pathogenic | 0.9009 | pathogenic | -1.014 | Destabilizing | 0.648 | D | 0.715 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.