Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35323 | 106192;106193;106194 | chr2:178530648;178530647;178530646 | chr2:179395375;179395374;179395373 |
N2AB | 33682 | 101269;101270;101271 | chr2:178530648;178530647;178530646 | chr2:179395375;179395374;179395373 |
N2A | 32755 | 98488;98489;98490 | chr2:178530648;178530647;178530646 | chr2:179395375;179395374;179395373 |
N2B | 26258 | 78997;78998;78999 | chr2:178530648;178530647;178530646 | chr2:179395375;179395374;179395373 |
Novex-1 | 26383 | 79372;79373;79374 | chr2:178530648;178530647;178530646 | chr2:179395375;179395374;179395373 |
Novex-2 | 26450 | 79573;79574;79575 | chr2:178530648;178530647;178530646 | chr2:179395375;179395374;179395373 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/S | rs372749780 | -0.613 | 0.916 | N | 0.363 | 0.265 | None | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
G/S | rs372749780 | -0.613 | 0.916 | N | 0.363 | 0.265 | None | gnomAD-4.0.0 | 1.36827E-06 | None | None | None | None | N | None | 2.98704E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.6564E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.4249 | ambiguous | 0.3835 | ambiguous | -0.309 | Destabilizing | 0.984 | D | 0.449 | neutral | N | 0.495320892 | None | None | N |
G/C | 0.4998 | ambiguous | 0.4633 | ambiguous | -0.889 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | N | 0.460784677 | None | None | N |
G/D | 0.2694 | likely_benign | 0.2553 | benign | -0.5 | Destabilizing | 0.998 | D | 0.705 | prob.neutral | N | 0.491590484 | None | None | N |
G/E | 0.3059 | likely_benign | 0.2747 | benign | -0.635 | Destabilizing | 0.998 | D | 0.693 | prob.neutral | None | None | None | None | N |
G/F | 0.9115 | likely_pathogenic | 0.8891 | pathogenic | -0.891 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
G/H | 0.572 | likely_pathogenic | 0.5258 | ambiguous | -0.481 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | N |
G/I | 0.8301 | likely_pathogenic | 0.778 | pathogenic | -0.359 | Destabilizing | 0.996 | D | 0.714 | prob.delet. | None | None | None | None | N |
G/K | 0.4725 | ambiguous | 0.418 | ambiguous | -0.872 | Destabilizing | 0.998 | D | 0.691 | prob.neutral | None | None | None | None | N |
G/L | 0.8561 | likely_pathogenic | 0.8218 | pathogenic | -0.359 | Destabilizing | 0.996 | D | 0.705 | prob.neutral | None | None | None | None | N |
G/M | 0.8462 | likely_pathogenic | 0.8053 | pathogenic | -0.544 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | N |
G/N | 0.3505 | ambiguous | 0.3175 | benign | -0.555 | Destabilizing | 0.998 | D | 0.725 | prob.delet. | None | None | None | None | N |
G/P | 0.9905 | likely_pathogenic | 0.9895 | pathogenic | -0.308 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | None | None | None | None | N |
G/Q | 0.3798 | ambiguous | 0.3405 | ambiguous | -0.786 | Destabilizing | 0.999 | D | 0.724 | prob.delet. | None | None | None | None | N |
G/R | 0.3352 | likely_benign | 0.2966 | benign | -0.439 | Destabilizing | 0.999 | D | 0.714 | prob.delet. | N | 0.486673612 | None | None | N |
G/S | 0.1682 | likely_benign | 0.1585 | benign | -0.731 | Destabilizing | 0.916 | D | 0.363 | neutral | N | 0.463516474 | None | None | N |
G/T | 0.5535 | ambiguous | 0.4927 | ambiguous | -0.787 | Destabilizing | 0.996 | D | 0.679 | prob.neutral | None | None | None | None | N |
G/V | 0.7544 | likely_pathogenic | 0.7015 | pathogenic | -0.308 | Destabilizing | 0.896 | D | 0.47 | neutral | N | 0.514439105 | None | None | N |
G/W | 0.7509 | likely_pathogenic | 0.7167 | pathogenic | -1.077 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
G/Y | 0.7949 | likely_pathogenic | 0.7412 | pathogenic | -0.721 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.