Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35343 | 106252;106253;106254 | chr2:178530588;178530587;178530586 | chr2:179395315;179395314;179395313 |
N2AB | 33702 | 101329;101330;101331 | chr2:178530588;178530587;178530586 | chr2:179395315;179395314;179395313 |
N2A | 32775 | 98548;98549;98550 | chr2:178530588;178530587;178530586 | chr2:179395315;179395314;179395313 |
N2B | 26278 | 79057;79058;79059 | chr2:178530588;178530587;178530586 | chr2:179395315;179395314;179395313 |
Novex-1 | 26403 | 79432;79433;79434 | chr2:178530588;178530587;178530586 | chr2:179395315;179395314;179395313 |
Novex-2 | 26470 | 79633;79634;79635 | chr2:178530588;178530587;178530586 | chr2:179395315;179395314;179395313 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs774519928 | -1.431 | 0.92 | N | 0.551 | 0.282 | 0.277317399466 | gnomAD-2.1.1 | 8.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.77E-05 | 0 |
E/K | rs774519928 | -1.431 | 0.92 | N | 0.551 | 0.282 | 0.277317399466 | gnomAD-4.0.0 | 4.77262E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.57241E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3106 | likely_benign | 0.2673 | benign | -1.285 | Destabilizing | 0.704 | D | 0.443 | neutral | N | 0.497002743 | None | None | N |
E/C | 0.9129 | likely_pathogenic | 0.9018 | pathogenic | -1.008 | Destabilizing | 0.1 | N | 0.557 | neutral | None | None | None | None | N |
E/D | 0.4864 | ambiguous | 0.4231 | ambiguous | -1.683 | Destabilizing | 0.704 | D | 0.493 | neutral | N | 0.496445383 | None | None | N |
E/F | 0.8794 | likely_pathogenic | 0.8416 | pathogenic | -1.113 | Destabilizing | 0.997 | D | 0.638 | neutral | None | None | None | None | N |
E/G | 0.4989 | ambiguous | 0.3984 | ambiguous | -1.681 | Destabilizing | 0.826 | D | 0.55 | neutral | N | 0.513857708 | None | None | N |
E/H | 0.694 | likely_pathogenic | 0.6335 | pathogenic | -1.413 | Destabilizing | 0.991 | D | 0.527 | neutral | None | None | None | None | N |
E/I | 0.4738 | ambiguous | 0.4339 | ambiguous | -0.173 | Destabilizing | 0.982 | D | 0.634 | neutral | None | None | None | None | N |
E/K | 0.3588 | ambiguous | 0.2819 | benign | -1.708 | Destabilizing | 0.92 | D | 0.551 | neutral | N | 0.47287509 | None | None | N |
E/L | 0.6727 | likely_pathogenic | 0.6062 | pathogenic | -0.173 | Destabilizing | 0.939 | D | 0.585 | neutral | None | None | None | None | N |
E/M | 0.614 | likely_pathogenic | 0.5614 | ambiguous | 0.489 | Stabilizing | 0.997 | D | 0.626 | neutral | None | None | None | None | N |
E/N | 0.5993 | likely_pathogenic | 0.5401 | ambiguous | -1.943 | Destabilizing | 0.17 | N | 0.265 | neutral | None | None | None | None | N |
E/P | 0.9962 | likely_pathogenic | 0.9924 | pathogenic | -0.525 | Destabilizing | 0.997 | D | 0.565 | neutral | None | None | None | None | N |
E/Q | 0.2016 | likely_benign | 0.1804 | benign | -1.653 | Destabilizing | 0.959 | D | 0.512 | neutral | N | 0.478147624 | None | None | N |
E/R | 0.5354 | ambiguous | 0.4385 | ambiguous | -1.58 | Destabilizing | 0.969 | D | 0.513 | neutral | None | None | None | None | N |
E/S | 0.3657 | ambiguous | 0.3198 | benign | -2.516 | Highly Destabilizing | 0.373 | N | 0.234 | neutral | None | None | None | None | N |
E/T | 0.3337 | likely_benign | 0.3034 | benign | -2.162 | Highly Destabilizing | 0.17 | N | 0.301 | neutral | None | None | None | None | N |
E/V | 0.3227 | likely_benign | 0.2946 | benign | -0.525 | Destabilizing | 0.92 | D | 0.581 | neutral | N | 0.496445383 | None | None | N |
E/W | 0.9728 | likely_pathogenic | 0.9592 | pathogenic | -1.243 | Destabilizing | 0.999 | D | 0.682 | prob.neutral | None | None | None | None | N |
E/Y | 0.8473 | likely_pathogenic | 0.794 | pathogenic | -0.994 | Destabilizing | 0.997 | D | 0.621 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.