Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35346 | 106261;106262;106263 | chr2:178530579;178530578;178530577 | chr2:179395306;179395305;179395304 |
N2AB | 33705 | 101338;101339;101340 | chr2:178530579;178530578;178530577 | chr2:179395306;179395305;179395304 |
N2A | 32778 | 98557;98558;98559 | chr2:178530579;178530578;178530577 | chr2:179395306;179395305;179395304 |
N2B | 26281 | 79066;79067;79068 | chr2:178530579;178530578;178530577 | chr2:179395306;179395305;179395304 |
Novex-1 | 26406 | 79441;79442;79443 | chr2:178530579;178530578;178530577 | chr2:179395306;179395305;179395304 |
Novex-2 | 26473 | 79642;79643;79644 | chr2:178530579;178530578;178530577 | chr2:179395306;179395305;179395304 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | rs1688672739 | None | 0.999 | D | 0.678 | 0.563 | 0.713815690768 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/M | rs1688672739 | None | 0.999 | D | 0.678 | 0.563 | 0.713815690768 | gnomAD-4.0.0 | 6.5703E-06 | None | None | None | None | N | None | 2.41266E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9608 | likely_pathogenic | 0.954 | pathogenic | -3.188 | Highly Destabilizing | 0.964 | D | 0.69 | prob.neutral | None | None | None | None | N |
I/C | 0.9708 | likely_pathogenic | 0.9683 | pathogenic | -2.449 | Highly Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
I/D | 0.995 | likely_pathogenic | 0.9929 | pathogenic | -3.911 | Highly Destabilizing | 0.998 | D | 0.883 | deleterious | None | None | None | None | N |
I/E | 0.9853 | likely_pathogenic | 0.9801 | pathogenic | -3.612 | Highly Destabilizing | 0.999 | D | 0.895 | deleterious | None | None | None | None | N |
I/F | 0.5368 | ambiguous | 0.5128 | ambiguous | -1.889 | Destabilizing | 0.999 | D | 0.705 | prob.neutral | D | 0.550201207 | None | None | N |
I/G | 0.9892 | likely_pathogenic | 0.9866 | pathogenic | -3.767 | Highly Destabilizing | 0.171 | N | 0.637 | neutral | None | None | None | None | N |
I/H | 0.9812 | likely_pathogenic | 0.9753 | pathogenic | -3.321 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
I/K | 0.9637 | likely_pathogenic | 0.9494 | pathogenic | -2.611 | Highly Destabilizing | 0.998 | D | 0.893 | deleterious | None | None | None | None | N |
I/L | 0.3177 | likely_benign | 0.3028 | benign | -1.437 | Destabilizing | 0.992 | D | 0.458 | neutral | D | 0.539744874 | None | None | N |
I/M | 0.2274 | likely_benign | 0.2192 | benign | -1.545 | Destabilizing | 0.999 | D | 0.678 | prob.neutral | D | 0.606910103 | None | None | N |
I/N | 0.9427 | likely_pathogenic | 0.9216 | pathogenic | -3.242 | Highly Destabilizing | 0.997 | D | 0.893 | deleterious | D | 0.633860844 | None | None | N |
I/P | 0.9956 | likely_pathogenic | 0.9941 | pathogenic | -2.013 | Highly Destabilizing | 0.999 | D | 0.891 | deleterious | None | None | None | None | N |
I/Q | 0.9728 | likely_pathogenic | 0.9643 | pathogenic | -2.953 | Highly Destabilizing | 0.999 | D | 0.906 | deleterious | None | None | None | None | N |
I/R | 0.9519 | likely_pathogenic | 0.9367 | pathogenic | -2.432 | Highly Destabilizing | 0.999 | D | 0.883 | deleterious | None | None | None | None | N |
I/S | 0.9646 | likely_pathogenic | 0.9564 | pathogenic | -3.816 | Highly Destabilizing | 0.98 | D | 0.824 | deleterious | D | 0.617609319 | None | None | N |
I/T | 0.9679 | likely_pathogenic | 0.9614 | pathogenic | -3.372 | Highly Destabilizing | 0.997 | D | 0.757 | deleterious | D | 0.61720571 | None | None | N |
I/V | 0.2638 | likely_benign | 0.2632 | benign | -2.013 | Highly Destabilizing | 0.992 | D | 0.404 | neutral | D | 0.548274245 | None | None | N |
I/W | 0.9689 | likely_pathogenic | 0.9626 | pathogenic | -2.359 | Highly Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
I/Y | 0.9074 | likely_pathogenic | 0.8889 | pathogenic | -2.199 | Highly Destabilizing | 0.999 | D | 0.764 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.