Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35360 | 106303;106304;106305 | chr2:178530537;178530536;178530535 | chr2:179395264;179395263;179395262 |
N2AB | 33719 | 101380;101381;101382 | chr2:178530537;178530536;178530535 | chr2:179395264;179395263;179395262 |
N2A | 32792 | 98599;98600;98601 | chr2:178530537;178530536;178530535 | chr2:179395264;179395263;179395262 |
N2B | 26295 | 79108;79109;79110 | chr2:178530537;178530536;178530535 | chr2:179395264;179395263;179395262 |
Novex-1 | 26420 | 79483;79484;79485 | chr2:178530537;178530536;178530535 | chr2:179395264;179395263;179395262 |
Novex-2 | 26487 | 79684;79685;79686 | chr2:178530537;178530536;178530535 | chr2:179395264;179395263;179395262 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.999 | N | 0.648 | 0.194 | 0.299770980665 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
E/Q | None | None | 1.0 | N | 0.753 | 0.17 | 0.293502639404 | gnomAD-4.0.0 | 2.05243E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 7.55706E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3512 | ambiguous | 0.3179 | benign | -1.155 | Destabilizing | 0.999 | D | 0.747 | deleterious | N | 0.484313658 | None | None | N |
E/C | 0.951 | likely_pathogenic | 0.9435 | pathogenic | -0.746 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
E/D | 0.5386 | ambiguous | 0.5143 | ambiguous | -1.44 | Destabilizing | 0.999 | D | 0.648 | neutral | N | 0.486719968 | None | None | N |
E/F | 0.9232 | likely_pathogenic | 0.9091 | pathogenic | -1.074 | Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
E/G | 0.528 | ambiguous | 0.4893 | ambiguous | -1.511 | Destabilizing | 1.0 | D | 0.829 | deleterious | N | 0.500558262 | None | None | N |
E/H | 0.7783 | likely_pathogenic | 0.75 | pathogenic | -1.324 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
E/I | 0.5773 | likely_pathogenic | 0.5262 | ambiguous | -0.174 | Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
E/K | 0.3477 | ambiguous | 0.32 | benign | -0.977 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | N | 0.497520031 | None | None | N |
E/L | 0.72 | likely_pathogenic | 0.6862 | pathogenic | -0.174 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
E/M | 0.6712 | likely_pathogenic | 0.6373 | pathogenic | 0.403 | Stabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
E/N | 0.6835 | likely_pathogenic | 0.6495 | pathogenic | -1.261 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
E/P | 0.9955 | likely_pathogenic | 0.9961 | pathogenic | -0.482 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
E/Q | 0.2629 | likely_benign | 0.2494 | benign | -1.129 | Destabilizing | 1.0 | D | 0.753 | deleterious | N | 0.498944184 | None | None | N |
E/R | 0.5814 | likely_pathogenic | 0.5578 | ambiguous | -0.883 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
E/S | 0.4894 | ambiguous | 0.4518 | ambiguous | -1.739 | Destabilizing | 0.999 | D | 0.753 | deleterious | None | None | None | None | N |
E/T | 0.4949 | ambiguous | 0.4511 | ambiguous | -1.42 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
E/V | 0.3788 | ambiguous | 0.3466 | ambiguous | -0.482 | Destabilizing | 1.0 | D | 0.867 | deleterious | N | 0.473875168 | None | None | N |
E/W | 0.983 | likely_pathogenic | 0.98 | pathogenic | -1.015 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
E/Y | 0.9046 | likely_pathogenic | 0.8871 | pathogenic | -0.84 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.