Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35424 | 106495;106496;106497 | chr2:178530345;178530344;178530343 | chr2:179395072;179395071;179395070 |
N2AB | 33783 | 101572;101573;101574 | chr2:178530345;178530344;178530343 | chr2:179395072;179395071;179395070 |
N2A | 32856 | 98791;98792;98793 | chr2:178530345;178530344;178530343 | chr2:179395072;179395071;179395070 |
N2B | 26359 | 79300;79301;79302 | chr2:178530345;178530344;178530343 | chr2:179395072;179395071;179395070 |
Novex-1 | 26484 | 79675;79676;79677 | chr2:178530345;178530344;178530343 | chr2:179395072;179395071;179395070 |
Novex-2 | 26551 | 79876;79877;79878 | chr2:178530345;178530344;178530343 | chr2:179395072;179395071;179395070 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.979 | N | 0.306 | 0.132 | 0.211220785272 | gnomAD-4.0.0 | 1.20034E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31253E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0868 | likely_benign | 0.0884 | benign | -0.44 | Destabilizing | 0.979 | D | 0.306 | neutral | N | 0.496002666 | None | None | N |
T/C | 0.577 | likely_pathogenic | 0.5864 | pathogenic | -0.423 | Destabilizing | 0.999 | D | 0.682 | prob.neutral | None | None | None | None | N |
T/D | 0.3678 | ambiguous | 0.3731 | ambiguous | 0.274 | Stabilizing | 0.993 | D | 0.567 | neutral | None | None | None | None | N |
T/E | 0.2758 | likely_benign | 0.2734 | benign | 0.221 | Stabilizing | 0.993 | D | 0.565 | neutral | None | None | None | None | N |
T/F | 0.2535 | likely_benign | 0.2594 | benign | -0.789 | Destabilizing | 0.998 | D | 0.721 | prob.delet. | None | None | None | None | N |
T/G | 0.2884 | likely_benign | 0.2922 | benign | -0.606 | Destabilizing | 0.993 | D | 0.547 | neutral | None | None | None | None | N |
T/H | 0.3199 | likely_benign | 0.3108 | benign | -0.822 | Destabilizing | 0.999 | D | 0.688 | prob.neutral | None | None | None | None | N |
T/I | 0.1966 | likely_benign | 0.2087 | benign | -0.116 | Destabilizing | 0.997 | D | 0.624 | neutral | N | 0.487383183 | None | None | N |
T/K | 0.2015 | likely_benign | 0.2006 | benign | -0.432 | Destabilizing | 0.993 | D | 0.572 | neutral | None | None | None | None | N |
T/L | 0.129 | likely_benign | 0.1331 | benign | -0.116 | Destabilizing | 0.993 | D | 0.473 | neutral | None | None | None | None | N |
T/M | 0.1143 | likely_benign | 0.1192 | benign | -0.046 | Destabilizing | 0.999 | D | 0.706 | prob.neutral | None | None | None | None | N |
T/N | 0.1381 | likely_benign | 0.1402 | benign | -0.308 | Destabilizing | 0.991 | D | 0.519 | neutral | N | 0.475955468 | None | None | N |
T/P | 0.2322 | likely_benign | 0.235 | benign | -0.193 | Destabilizing | 0.997 | D | 0.627 | neutral | D | 0.523074624 | None | None | N |
T/Q | 0.265 | likely_benign | 0.2589 | benign | -0.496 | Destabilizing | 0.998 | D | 0.725 | prob.delet. | None | None | None | None | N |
T/R | 0.1647 | likely_benign | 0.1649 | benign | -0.159 | Destabilizing | 0.998 | D | 0.626 | neutral | None | None | None | None | N |
T/S | 0.1217 | likely_benign | 0.1237 | benign | -0.564 | Destabilizing | 0.979 | D | 0.396 | neutral | N | 0.475262034 | None | None | N |
T/V | 0.1821 | likely_benign | 0.189 | benign | -0.193 | Destabilizing | 0.984 | D | 0.436 | neutral | None | None | None | None | N |
T/W | 0.5915 | likely_pathogenic | 0.605 | pathogenic | -0.766 | Destabilizing | 0.999 | D | 0.687 | prob.neutral | None | None | None | None | N |
T/Y | 0.3121 | likely_benign | 0.3201 | benign | -0.496 | Destabilizing | 0.998 | D | 0.731 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.