Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35441 | 106546;106547;106548 | chr2:178530294;178530293;178530292 | chr2:179395021;179395020;179395019 |
N2AB | 33800 | 101623;101624;101625 | chr2:178530294;178530293;178530292 | chr2:179395021;179395020;179395019 |
N2A | 32873 | 98842;98843;98844 | chr2:178530294;178530293;178530292 | chr2:179395021;179395020;179395019 |
N2B | 26376 | 79351;79352;79353 | chr2:178530294;178530293;178530292 | chr2:179395021;179395020;179395019 |
Novex-1 | 26501 | 79726;79727;79728 | chr2:178530294;178530293;178530292 | chr2:179395021;179395020;179395019 |
Novex-2 | 26568 | 79927;79928;79929 | chr2:178530294;178530293;178530292 | chr2:179395021;179395020;179395019 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | None | None | 0.278 | N | 0.793 | 0.239 | 0.342631996419 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4133 | ambiguous | 0.4375 | ambiguous | -1.356 | Destabilizing | None | N | 0.425 | neutral | N | 0.444068683 | None | None | N |
V/C | 0.8801 | likely_pathogenic | 0.8891 | pathogenic | -0.537 | Destabilizing | 0.922 | D | 0.797 | deleterious | None | None | None | None | N |
V/D | 0.9523 | likely_pathogenic | 0.9599 | pathogenic | -1.892 | Destabilizing | 0.438 | N | 0.88 | deleterious | N | 0.460228472 | None | None | N |
V/E | 0.8931 | likely_pathogenic | 0.9014 | pathogenic | -1.602 | Destabilizing | 0.338 | N | 0.82 | deleterious | None | None | None | None | N |
V/F | 0.3315 | likely_benign | 0.3677 | ambiguous | -0.617 | Destabilizing | 0.278 | N | 0.793 | deleterious | N | 0.496153729 | None | None | N |
V/G | 0.6108 | likely_pathogenic | 0.6123 | pathogenic | -1.939 | Destabilizing | 0.052 | N | 0.848 | deleterious | N | 0.506928083 | None | None | N |
V/H | 0.9649 | likely_pathogenic | 0.973 | pathogenic | -1.984 | Destabilizing | 0.922 | D | 0.885 | deleterious | None | None | None | None | N |
V/I | 0.0771 | likely_benign | 0.0889 | benign | 0.301 | Stabilizing | None | N | 0.288 | neutral | N | 0.486782097 | None | None | N |
V/K | 0.928 | likely_pathogenic | 0.9394 | pathogenic | -0.668 | Destabilizing | 0.338 | N | 0.821 | deleterious | None | None | None | None | N |
V/L | 0.2487 | likely_benign | 0.2817 | benign | 0.301 | Stabilizing | 0.008 | N | 0.487 | neutral | N | 0.48747553 | None | None | N |
V/M | 0.2462 | likely_benign | 0.2726 | benign | 0.122 | Stabilizing | 0.338 | N | 0.694 | prob.neutral | None | None | None | None | N |
V/N | 0.8791 | likely_pathogenic | 0.9011 | pathogenic | -1.179 | Destabilizing | 0.508 | D | 0.887 | deleterious | None | None | None | None | N |
V/P | 0.9585 | likely_pathogenic | 0.9694 | pathogenic | -0.227 | Destabilizing | 0.508 | D | 0.845 | deleterious | None | None | None | None | N |
V/Q | 0.8904 | likely_pathogenic | 0.9002 | pathogenic | -0.841 | Destabilizing | 0.508 | D | 0.851 | deleterious | None | None | None | None | N |
V/R | 0.8857 | likely_pathogenic | 0.9 | pathogenic | -0.99 | Destabilizing | 0.508 | D | 0.889 | deleterious | None | None | None | None | N |
V/S | 0.6798 | likely_pathogenic | 0.7089 | pathogenic | -1.732 | Destabilizing | 0.068 | N | 0.825 | deleterious | None | None | None | None | N |
V/T | 0.5459 | ambiguous | 0.5758 | pathogenic | -1.286 | Destabilizing | 0.127 | N | 0.73 | prob.delet. | None | None | None | None | N |
V/W | 0.9576 | likely_pathogenic | 0.9668 | pathogenic | -1.21 | Destabilizing | 0.922 | D | 0.87 | deleterious | None | None | None | None | N |
V/Y | 0.8686 | likely_pathogenic | 0.889 | pathogenic | -0.724 | Destabilizing | 0.508 | D | 0.787 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.