Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35447 | 106564;106565;106566 | chr2:178530276;178530275;178530274 | chr2:179395003;179395002;179395001 |
N2AB | 33806 | 101641;101642;101643 | chr2:178530276;178530275;178530274 | chr2:179395003;179395002;179395001 |
N2A | 32879 | 98860;98861;98862 | chr2:178530276;178530275;178530274 | chr2:179395003;179395002;179395001 |
N2B | 26382 | 79369;79370;79371 | chr2:178530276;178530275;178530274 | chr2:179395003;179395002;179395001 |
Novex-1 | 26507 | 79744;79745;79746 | chr2:178530276;178530275;178530274 | chr2:179395003;179395002;179395001 |
Novex-2 | 26574 | 79945;79946;79947 | chr2:178530276;178530275;178530274 | chr2:179395003;179395002;179395001 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/R | None | None | 0.986 | D | 0.571 | 0.627 | 0.565865824572 | gnomAD-4.0.0 | 8.23794E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.08255E-05 | 0 | 0 |
P/S | None | None | 0.271 | D | 0.254 | 0.552 | 0.379366414296 | gnomAD-4.0.0 | 2.05894E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.70579E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.4118 | ambiguous | 0.4231 | ambiguous | -0.555 | Destabilizing | 0.664 | D | 0.436 | neutral | D | 0.545655813 | None | None | I |
P/C | 0.9295 | likely_pathogenic | 0.9285 | pathogenic | -0.601 | Destabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | I |
P/D | 0.8073 | likely_pathogenic | 0.8037 | pathogenic | -0.452 | Destabilizing | 0.978 | D | 0.472 | neutral | None | None | None | None | I |
P/E | 0.6715 | likely_pathogenic | 0.6545 | pathogenic | -0.579 | Destabilizing | 0.927 | D | 0.463 | neutral | None | None | None | None | I |
P/F | 0.8949 | likely_pathogenic | 0.8862 | pathogenic | -0.843 | Destabilizing | 0.978 | D | 0.668 | neutral | None | None | None | None | I |
P/G | 0.7357 | likely_pathogenic | 0.7257 | pathogenic | -0.675 | Destabilizing | 0.927 | D | 0.508 | neutral | None | None | None | None | I |
P/H | 0.7328 | likely_pathogenic | 0.7257 | pathogenic | -0.284 | Destabilizing | 0.999 | D | 0.582 | neutral | D | 0.605277821 | None | None | I |
P/I | 0.6543 | likely_pathogenic | 0.6492 | pathogenic | -0.39 | Destabilizing | 0.957 | D | 0.633 | neutral | None | None | None | None | I |
P/K | 0.7739 | likely_pathogenic | 0.7693 | pathogenic | -0.506 | Destabilizing | 0.927 | D | 0.465 | neutral | None | None | None | None | I |
P/L | 0.4595 | ambiguous | 0.4622 | ambiguous | -0.39 | Destabilizing | 0.029 | N | 0.301 | neutral | D | 0.598545046 | None | None | I |
P/M | 0.7215 | likely_pathogenic | 0.7194 | pathogenic | -0.343 | Destabilizing | 0.978 | D | 0.584 | neutral | None | None | None | None | I |
P/N | 0.7603 | likely_pathogenic | 0.7519 | pathogenic | -0.209 | Destabilizing | 0.978 | D | 0.567 | neutral | None | None | None | None | I |
P/Q | 0.6121 | likely_pathogenic | 0.5956 | pathogenic | -0.493 | Destabilizing | 0.989 | D | 0.467 | neutral | None | None | None | None | I |
P/R | 0.7041 | likely_pathogenic | 0.6973 | pathogenic | 0.056 | Stabilizing | 0.986 | D | 0.571 | neutral | D | 0.614160799 | None | None | I |
P/S | 0.5986 | likely_pathogenic | 0.5916 | pathogenic | -0.54 | Destabilizing | 0.271 | N | 0.254 | neutral | D | 0.535932122 | None | None | I |
P/T | 0.4186 | ambiguous | 0.4201 | ambiguous | -0.573 | Destabilizing | 0.905 | D | 0.442 | neutral | D | 0.604874213 | None | None | I |
P/V | 0.5608 | ambiguous | 0.5568 | ambiguous | -0.41 | Destabilizing | 0.864 | D | 0.517 | neutral | None | None | None | None | I |
P/W | 0.953 | likely_pathogenic | 0.9479 | pathogenic | -0.909 | Destabilizing | 0.999 | D | 0.694 | prob.neutral | None | None | None | None | I |
P/Y | 0.87 | likely_pathogenic | 0.8617 | pathogenic | -0.617 | Destabilizing | 0.996 | D | 0.671 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.