Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35456 | 106591;106592;106593 | chr2:178530249;178530248;178530247 | chr2:179394976;179394975;179394974 |
N2AB | 33815 | 101668;101669;101670 | chr2:178530249;178530248;178530247 | chr2:179394976;179394975;179394974 |
N2A | 32888 | 98887;98888;98889 | chr2:178530249;178530248;178530247 | chr2:179394976;179394975;179394974 |
N2B | 26391 | 79396;79397;79398 | chr2:178530249;178530248;178530247 | chr2:179394976;179394975;179394974 |
Novex-1 | 26516 | 79771;79772;79773 | chr2:178530249;178530248;178530247 | chr2:179394976;179394975;179394974 |
Novex-2 | 26583 | 79972;79973;79974 | chr2:178530249;178530248;178530247 | chr2:179394976;179394975;179394974 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/V | rs1288351302 | -0.056 | 1.0 | N | 0.673 | 0.495 | 0.516326692288 | gnomAD-4.0.0 | 1.64028E-06 | None | None | None | None | N | None | 0 | 2.48188E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.3994 | ambiguous | 0.3948 | ambiguous | -0.618 | Destabilizing | 0.995 | D | 0.557 | neutral | N | 0.478981518 | None | None | N |
D/C | 0.8913 | likely_pathogenic | 0.8834 | pathogenic | -0.234 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
D/E | 0.3836 | ambiguous | 0.3731 | ambiguous | -0.302 | Destabilizing | 0.99 | D | 0.479 | neutral | N | 0.456798659 | None | None | N |
D/F | 0.8434 | likely_pathogenic | 0.8489 | pathogenic | -0.185 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
D/G | 0.2275 | likely_benign | 0.2216 | benign | -0.882 | Destabilizing | 0.99 | D | 0.567 | neutral | N | 0.457897841 | None | None | N |
D/H | 0.6414 | likely_pathogenic | 0.6399 | pathogenic | -0.109 | Destabilizing | 1.0 | D | 0.6 | neutral | N | 0.503682365 | None | None | N |
D/I | 0.8215 | likely_pathogenic | 0.8291 | pathogenic | 0.058 | Stabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
D/K | 0.7478 | likely_pathogenic | 0.7354 | pathogenic | 0.045 | Stabilizing | 0.998 | D | 0.574 | neutral | None | None | None | None | N |
D/L | 0.7717 | likely_pathogenic | 0.7752 | pathogenic | 0.058 | Stabilizing | 0.999 | D | 0.68 | prob.neutral | None | None | None | None | N |
D/M | 0.8979 | likely_pathogenic | 0.9024 | pathogenic | 0.282 | Stabilizing | 1.0 | D | 0.674 | neutral | None | None | None | None | N |
D/N | 0.1407 | likely_benign | 0.1267 | benign | -0.472 | Destabilizing | 0.561 | D | 0.367 | neutral | N | 0.475351595 | None | None | N |
D/P | 0.9771 | likely_pathogenic | 0.982 | pathogenic | -0.145 | Destabilizing | 1.0 | D | 0.599 | neutral | None | None | None | None | N |
D/Q | 0.7067 | likely_pathogenic | 0.6915 | pathogenic | -0.374 | Destabilizing | 0.999 | D | 0.579 | neutral | None | None | None | None | N |
D/R | 0.7529 | likely_pathogenic | 0.7469 | pathogenic | 0.3 | Stabilizing | 0.999 | D | 0.613 | neutral | None | None | None | None | N |
D/S | 0.2757 | likely_benign | 0.2569 | benign | -0.614 | Destabilizing | 0.992 | D | 0.527 | neutral | None | None | None | None | N |
D/T | 0.6637 | likely_pathogenic | 0.6617 | pathogenic | -0.389 | Destabilizing | 0.992 | D | 0.583 | neutral | None | None | None | None | N |
D/V | 0.6146 | likely_pathogenic | 0.6328 | pathogenic | -0.145 | Destabilizing | 1.0 | D | 0.673 | neutral | N | 0.487806609 | None | None | N |
D/W | 0.9509 | likely_pathogenic | 0.9544 | pathogenic | 0.093 | Stabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | N |
D/Y | 0.3713 | ambiguous | 0.3887 | ambiguous | 0.08 | Stabilizing | 1.0 | D | 0.677 | prob.neutral | N | 0.503935855 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.