Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35457 | 106594;106595;106596 | chr2:178530246;178530245;178530244 | chr2:179394973;179394972;179394971 |
N2AB | 33816 | 101671;101672;101673 | chr2:178530246;178530245;178530244 | chr2:179394973;179394972;179394971 |
N2A | 32889 | 98890;98891;98892 | chr2:178530246;178530245;178530244 | chr2:179394973;179394972;179394971 |
N2B | 26392 | 79399;79400;79401 | chr2:178530246;178530245;178530244 | chr2:179394973;179394972;179394971 |
Novex-1 | 26517 | 79774;79775;79776 | chr2:178530246;178530245;178530244 | chr2:179394973;179394972;179394971 |
Novex-2 | 26584 | 79975;79976;79977 | chr2:178530246;178530245;178530244 | chr2:179394973;179394972;179394971 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/V | None | None | 1.0 | D | 0.678 | 0.583 | 0.719642243069 | gnomAD-4.0.0 | 6.93753E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.06937E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.3098 | likely_benign | 0.3133 | benign | -0.224 | Destabilizing | 0.999 | D | 0.506 | neutral | N | 0.491964574 | None | None | I |
G/C | 0.5236 | ambiguous | 0.4974 | ambiguous | -0.853 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | I |
G/D | 0.2073 | likely_benign | 0.1907 | benign | -0.717 | Destabilizing | 1.0 | D | 0.635 | neutral | None | None | None | None | I |
G/E | 0.2251 | likely_benign | 0.2098 | benign | -0.893 | Destabilizing | 1.0 | D | 0.662 | neutral | N | 0.483353292 | None | None | I |
G/F | 0.8254 | likely_pathogenic | 0.8228 | pathogenic | -1.048 | Destabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | I |
G/H | 0.5357 | ambiguous | 0.5097 | ambiguous | -0.395 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | I |
G/I | 0.6531 | likely_pathogenic | 0.6484 | pathogenic | -0.468 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | I |
G/K | 0.4115 | ambiguous | 0.3864 | ambiguous | -0.72 | Destabilizing | 1.0 | D | 0.66 | neutral | None | None | None | None | I |
G/L | 0.7262 | likely_pathogenic | 0.7296 | pathogenic | -0.468 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | I |
G/M | 0.7359 | likely_pathogenic | 0.7356 | pathogenic | -0.465 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | I |
G/N | 0.2797 | likely_benign | 0.2662 | benign | -0.388 | Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | I |
G/P | 0.9742 | likely_pathogenic | 0.9773 | pathogenic | -0.358 | Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | I |
G/Q | 0.3264 | likely_benign | 0.3102 | benign | -0.707 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | I |
G/R | 0.2948 | likely_benign | 0.2693 | benign | -0.237 | Destabilizing | 1.0 | D | 0.662 | neutral | N | 0.506194488 | None | None | I |
G/S | 0.1293 | likely_benign | 0.1262 | benign | -0.487 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | I |
G/T | 0.3878 | ambiguous | 0.3898 | ambiguous | -0.603 | Destabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | I |
G/V | 0.5637 | ambiguous | 0.5648 | pathogenic | -0.358 | Destabilizing | 1.0 | D | 0.678 | prob.neutral | D | 0.522439092 | None | None | I |
G/W | 0.6556 | likely_pathogenic | 0.639 | pathogenic | -1.168 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | I |
G/Y | 0.6879 | likely_pathogenic | 0.6713 | pathogenic | -0.834 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.