Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35462 | 106609;106610;106611 | chr2:178530107;178530106;178530105 | chr2:179394834;179394833;179394832 |
N2AB | 33821 | 101686;101687;101688 | chr2:178530107;178530106;178530105 | chr2:179394834;179394833;179394832 |
N2A | 32894 | 98905;98906;98907 | chr2:178530107;178530106;178530105 | chr2:179394834;179394833;179394832 |
N2B | 26397 | 79414;79415;79416 | chr2:178530107;178530106;178530105 | chr2:179394834;179394833;179394832 |
Novex-1 | 26522 | 79789;79790;79791 | chr2:178530107;178530106;178530105 | chr2:179394834;179394833;179394832 |
Novex-2 | 26589 | 79990;79991;79992 | chr2:178530107;178530106;178530105 | chr2:179394834;179394833;179394832 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/R | rs376392819 | None | 0.001 | N | 0.145 | 0.201 | None | gnomAD-3.1.2 | 3.94E-05 | None | None | None | None | N | None | 1.44746E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Q/R | rs376392819 | None | 0.001 | N | 0.145 | 0.201 | None | gnomAD-4.0.0 | 5.6268E-06 | None | None | None | None | N | None | 1.08213E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 8.50044E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1186 | likely_benign | 0.1178 | benign | -0.155 | Destabilizing | 0.206 | N | 0.457 | neutral | None | None | None | None | N |
Q/C | 0.6355 | likely_pathogenic | 0.6231 | pathogenic | 0.102 | Stabilizing | 0.981 | D | 0.513 | neutral | None | None | None | None | N |
Q/D | 0.2404 | likely_benign | 0.2371 | benign | 0.264 | Stabilizing | 0.386 | N | 0.399 | neutral | None | None | None | None | N |
Q/E | 0.0651 | likely_benign | 0.0671 | benign | 0.24 | Stabilizing | 0.164 | N | 0.407 | neutral | N | 0.437183649 | None | None | N |
Q/F | 0.6152 | likely_pathogenic | 0.6018 | pathogenic | -0.4 | Destabilizing | 0.932 | D | 0.502 | neutral | None | None | None | None | N |
Q/G | 0.183 | likely_benign | 0.1776 | benign | -0.326 | Destabilizing | 0.386 | N | 0.464 | neutral | None | None | None | None | N |
Q/H | 0.1875 | likely_benign | 0.1871 | benign | -0.166 | Destabilizing | 0.771 | D | 0.433 | neutral | N | 0.480091851 | None | None | N |
Q/I | 0.2981 | likely_benign | 0.2985 | benign | 0.202 | Stabilizing | 0.817 | D | 0.501 | neutral | None | None | None | None | N |
Q/K | 0.0827 | likely_benign | 0.0838 | benign | 0.189 | Stabilizing | 0.089 | N | 0.455 | neutral | N | 0.474125884 | None | None | N |
Q/L | 0.1318 | likely_benign | 0.1314 | benign | 0.202 | Stabilizing | 0.322 | N | 0.464 | neutral | N | 0.450462377 | None | None | N |
Q/M | 0.3233 | likely_benign | 0.3291 | benign | 0.322 | Stabilizing | 0.932 | D | 0.431 | neutral | None | None | None | None | N |
Q/N | 0.211 | likely_benign | 0.2083 | benign | -0.226 | Destabilizing | 0.386 | N | 0.425 | neutral | None | None | None | None | N |
Q/P | 0.0832 | likely_benign | 0.0808 | benign | 0.11 | Stabilizing | 0.771 | D | 0.423 | neutral | N | 0.412616065 | None | None | N |
Q/R | 0.0996 | likely_benign | 0.0993 | benign | 0.301 | Stabilizing | 0.001 | N | 0.145 | neutral | N | 0.472125729 | None | None | N |
Q/S | 0.1448 | likely_benign | 0.1451 | benign | -0.221 | Destabilizing | 0.386 | N | 0.419 | neutral | None | None | None | None | N |
Q/T | 0.1403 | likely_benign | 0.1396 | benign | -0.087 | Destabilizing | 0.386 | N | 0.425 | neutral | None | None | None | None | N |
Q/V | 0.2038 | likely_benign | 0.2092 | benign | 0.11 | Stabilizing | 0.386 | N | 0.445 | neutral | None | None | None | None | N |
Q/W | 0.4469 | ambiguous | 0.4486 | ambiguous | -0.399 | Destabilizing | 0.981 | D | 0.518 | neutral | None | None | None | None | N |
Q/Y | 0.4022 | ambiguous | 0.3973 | ambiguous | -0.12 | Destabilizing | 0.932 | D | 0.459 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.