Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35506 | 106741;106742;106743 | chr2:178529975;178529974;178529973 | chr2:179394702;179394701;179394700 |
N2AB | 33865 | 101818;101819;101820 | chr2:178529975;178529974;178529973 | chr2:179394702;179394701;179394700 |
N2A | 32938 | 99037;99038;99039 | chr2:178529975;178529974;178529973 | chr2:179394702;179394701;179394700 |
N2B | 26441 | 79546;79547;79548 | chr2:178529975;178529974;178529973 | chr2:179394702;179394701;179394700 |
Novex-1 | 26566 | 79921;79922;79923 | chr2:178529975;178529974;178529973 | chr2:179394702;179394701;179394700 |
Novex-2 | 26633 | 80122;80123;80124 | chr2:178529975;178529974;178529973 | chr2:179394702;179394701;179394700 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.001 | N | 0.12 | 0.112 | 0.247872288689 | gnomAD-4.0.0 | 6.93101E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.02866E-07 | 0 | 0 |
K/T | rs1688340193 | None | 0.003 | N | 0.217 | 0.317 | 0.273503213844 | gnomAD-4.0.0 | 6.23791E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.22293E-06 | 0 | 1.676E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4869 | ambiguous | 0.4942 | ambiguous | -0.483 | Destabilizing | 0.206 | N | 0.433 | neutral | None | None | None | None | N |
K/C | 0.8578 | likely_pathogenic | 0.8598 | pathogenic | -0.539 | Destabilizing | 0.981 | D | 0.584 | neutral | None | None | None | None | N |
K/D | 0.7289 | likely_pathogenic | 0.7356 | pathogenic | 0.054 | Stabilizing | 0.386 | N | 0.58 | neutral | None | None | None | None | N |
K/E | 0.2764 | likely_benign | 0.2774 | benign | 0.108 | Stabilizing | 0.164 | N | 0.568 | neutral | N | 0.445187056 | None | None | N |
K/F | 0.7504 | likely_pathogenic | 0.76 | pathogenic | -0.51 | Destabilizing | 0.932 | D | 0.613 | neutral | None | None | None | None | N |
K/G | 0.6674 | likely_pathogenic | 0.6784 | pathogenic | -0.772 | Destabilizing | 0.386 | N | 0.57 | neutral | None | None | None | None | N |
K/H | 0.3565 | ambiguous | 0.3692 | ambiguous | -1.181 | Destabilizing | 0.817 | D | 0.621 | neutral | None | None | None | None | N |
K/I | 0.3573 | ambiguous | 0.3643 | ambiguous | 0.229 | Stabilizing | 0.624 | D | 0.622 | neutral | N | 0.483670874 | None | None | N |
K/L | 0.3688 | ambiguous | 0.3812 | ambiguous | 0.229 | Stabilizing | 0.206 | N | 0.545 | neutral | None | None | None | None | N |
K/M | 0.2702 | likely_benign | 0.2815 | benign | 0.256 | Stabilizing | 0.932 | D | 0.616 | neutral | None | None | None | None | N |
K/N | 0.4552 | ambiguous | 0.4594 | ambiguous | -0.157 | Destabilizing | 0.322 | N | 0.554 | neutral | N | 0.462159451 | None | None | N |
K/P | 0.8772 | likely_pathogenic | 0.8829 | pathogenic | 0.022 | Stabilizing | 0.56 | D | 0.637 | neutral | None | None | None | None | N |
K/Q | 0.1775 | likely_benign | 0.1813 | benign | -0.376 | Destabilizing | 0.322 | N | 0.582 | neutral | N | 0.421312906 | None | None | N |
K/R | 0.1016 | likely_benign | 0.1063 | benign | -0.355 | Destabilizing | 0.001 | N | 0.12 | neutral | N | 0.441322819 | None | None | N |
K/S | 0.5022 | ambiguous | 0.5145 | ambiguous | -0.851 | Destabilizing | 0.115 | N | 0.548 | neutral | None | None | None | None | N |
K/T | 0.2261 | likely_benign | 0.2312 | benign | -0.612 | Destabilizing | 0.003 | N | 0.217 | neutral | N | 0.39808933 | None | None | N |
K/V | 0.3937 | ambiguous | 0.4004 | ambiguous | 0.022 | Stabilizing | 0.386 | N | 0.581 | neutral | None | None | None | None | N |
K/W | 0.8482 | likely_pathogenic | 0.8596 | pathogenic | -0.359 | Destabilizing | 0.981 | D | 0.603 | neutral | None | None | None | None | N |
K/Y | 0.6455 | likely_pathogenic | 0.6504 | pathogenic | -0.031 | Destabilizing | 0.932 | D | 0.611 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.