Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35609 | 107050;107051;107052 | chr2:178528926;178528925;178528924 | chr2:179393653;179393652;179393651 |
N2AB | 33968 | 102127;102128;102129 | chr2:178528926;178528925;178528924 | chr2:179393653;179393652;179393651 |
N2A | 33041 | 99346;99347;99348 | chr2:178528926;178528925;178528924 | chr2:179393653;179393652;179393651 |
N2B | 26544 | 79855;79856;79857 | chr2:178528926;178528925;178528924 | chr2:179393653;179393652;179393651 |
Novex-1 | 26669 | 80230;80231;80232 | chr2:178528926;178528925;178528924 | chr2:179393653;179393652;179393651 |
Novex-2 | 26736 | 80431;80432;80433 | chr2:178528926;178528925;178528924 | chr2:179393653;179393652;179393651 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | rs727504540 | -0.777 | 0.901 | N | 0.701 | 0.23 | 0.414539908741 | gnomAD-2.1.1 | 3.03063E-04 | None | None | None | None | N | None | 0 | 2.34742E-03 | None | 0 | 0 | None | 0 | None | 0 | 7.8E-06 | 1.40174E-04 |
I/M | rs727504540 | -0.777 | 0.901 | N | 0.701 | 0.23 | 0.414539908741 | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 0 | 2.6178E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/M | rs727504540 | -0.777 | 0.901 | N | 0.701 | 0.23 | 0.414539908741 | gnomAD-4.0.0 | 6.56804E-05 | None | None | None | None | N | None | 8.0079E-05 | 1.54995E-03 | None | 0 | 0 | None | 0 | 3.28731E-04 | 8.4754E-07 | 0 | 6.40348E-05 |
I/N | None | None | 0.983 | N | 0.864 | 0.658 | 0.857379640909 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
I/V | rs573508906 | -1.223 | 0.003 | N | 0.247 | 0.171 | 0.471211772063 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
I/V | rs573508906 | -1.223 | 0.003 | N | 0.247 | 0.171 | 0.471211772063 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.06868E-04 | 0 |
I/V | rs573508906 | -1.223 | 0.003 | N | 0.247 | 0.171 | 0.471211772063 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 0 | None | None | 0 | 0 | None | None | None | 1E-03 | None |
I/V | rs573508906 | -1.223 | 0.003 | N | 0.247 | 0.171 | 0.471211772063 | gnomAD-4.0.0 | 2.0295E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.69704E-05 | 3.39997E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7753 | likely_pathogenic | 0.7522 | pathogenic | -1.105 | Destabilizing | 0.415 | N | 0.758 | deleterious | None | None | None | None | N |
I/C | 0.9373 | likely_pathogenic | 0.9336 | pathogenic | -0.61 | Destabilizing | 0.989 | D | 0.78 | deleterious | None | None | None | None | N |
I/D | 0.9106 | likely_pathogenic | 0.91 | pathogenic | -0.66 | Destabilizing | 0.987 | D | 0.871 | deleterious | None | None | None | None | N |
I/E | 0.7907 | likely_pathogenic | 0.7952 | pathogenic | -0.725 | Destabilizing | 0.961 | D | 0.857 | deleterious | None | None | None | None | N |
I/F | 0.3339 | likely_benign | 0.3152 | benign | -0.892 | Destabilizing | 0.901 | D | 0.738 | prob.delet. | N | 0.480240993 | None | None | N |
I/G | 0.8947 | likely_pathogenic | 0.8859 | pathogenic | -1.34 | Destabilizing | 0.961 | D | 0.852 | deleterious | None | None | None | None | N |
I/H | 0.8665 | likely_pathogenic | 0.866 | pathogenic | -0.625 | Destabilizing | 0.996 | D | 0.869 | deleterious | None | None | None | None | N |
I/K | 0.6558 | likely_pathogenic | 0.6727 | pathogenic | -0.758 | Destabilizing | 0.961 | D | 0.858 | deleterious | None | None | None | None | N |
I/L | 0.2689 | likely_benign | 0.2491 | benign | -0.574 | Destabilizing | 0.19 | N | 0.421 | neutral | N | 0.486135176 | None | None | N |
I/M | 0.1534 | likely_benign | 0.144 | benign | -0.449 | Destabilizing | 0.901 | D | 0.701 | prob.neutral | N | 0.487868759 | None | None | N |
I/N | 0.5466 | ambiguous | 0.5357 | ambiguous | -0.429 | Destabilizing | 0.983 | D | 0.864 | deleterious | N | 0.488735551 | None | None | N |
I/P | 0.9172 | likely_pathogenic | 0.9117 | pathogenic | -0.718 | Destabilizing | 0.987 | D | 0.873 | deleterious | None | None | None | None | N |
I/Q | 0.7524 | likely_pathogenic | 0.7487 | pathogenic | -0.672 | Destabilizing | 0.987 | D | 0.868 | deleterious | None | None | None | None | N |
I/R | 0.63 | likely_pathogenic | 0.6393 | pathogenic | -0.142 | Destabilizing | 0.961 | D | 0.861 | deleterious | None | None | None | None | N |
I/S | 0.6943 | likely_pathogenic | 0.6741 | pathogenic | -0.912 | Destabilizing | 0.901 | D | 0.813 | deleterious | N | 0.488562192 | None | None | N |
I/T | 0.6971 | likely_pathogenic | 0.6793 | pathogenic | -0.871 | Destabilizing | 0.722 | D | 0.774 | deleterious | N | 0.488388834 | None | None | N |
I/V | 0.1816 | likely_benign | 0.1668 | benign | -0.718 | Destabilizing | 0.003 | N | 0.247 | neutral | N | 0.485615101 | None | None | N |
I/W | 0.8852 | likely_pathogenic | 0.8793 | pathogenic | -0.914 | Destabilizing | 0.996 | D | 0.862 | deleterious | None | None | None | None | N |
I/Y | 0.7157 | likely_pathogenic | 0.7055 | pathogenic | -0.703 | Destabilizing | 0.961 | D | 0.791 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.