Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35619 | 107080;107081;107082 | chr2:178528896;178528895;178528894 | chr2:179393623;179393622;179393621 |
N2AB | 33978 | 102157;102158;102159 | chr2:178528896;178528895;178528894 | chr2:179393623;179393622;179393621 |
N2A | 33051 | 99376;99377;99378 | chr2:178528896;178528895;178528894 | chr2:179393623;179393622;179393621 |
N2B | 26554 | 79885;79886;79887 | chr2:178528896;178528895;178528894 | chr2:179393623;179393622;179393621 |
Novex-1 | 26679 | 80260;80261;80262 | chr2:178528896;178528895;178528894 | chr2:179393623;179393622;179393621 |
Novex-2 | 26746 | 80461;80462;80463 | chr2:178528896;178528895;178528894 | chr2:179393623;179393622;179393621 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/H | None | None | 0.196 | N | 0.33 | 0.031 | 0.139678290688 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
N/I | None | None | 0.007 | N | 0.487 | 0.124 | 0.251639045875 | gnomAD-4.0.0 | 6.84139E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99399E-06 | 0 | 0 |
N/K | rs116604145 | None | 0.008 | N | 0.177 | 0.152 | 0.0401082797425 | gnomAD-4.0.0 | 1.36828E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.7988E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1188 | likely_benign | 0.1197 | benign | -0.557 | Destabilizing | None | N | 0.221 | neutral | None | None | None | None | N |
N/C | 0.2746 | likely_benign | 0.2779 | benign | 0.268 | Stabilizing | 0.245 | N | 0.531 | neutral | None | None | None | None | N |
N/D | 0.1234 | likely_benign | 0.1231 | benign | 0.182 | Stabilizing | 0.006 | N | 0.175 | neutral | N | 0.430663108 | None | None | N |
N/E | 0.2407 | likely_benign | 0.2359 | benign | 0.164 | Stabilizing | 0.004 | N | 0.171 | neutral | None | None | None | None | N |
N/F | 0.3687 | ambiguous | 0.3584 | ambiguous | -0.853 | Destabilizing | 0.085 | N | 0.539 | neutral | None | None | None | None | N |
N/G | 0.182 | likely_benign | 0.1902 | benign | -0.751 | Destabilizing | 0.002 | N | 0.189 | neutral | None | None | None | None | N |
N/H | 0.1008 | likely_benign | 0.1012 | benign | -0.728 | Destabilizing | 0.196 | N | 0.33 | neutral | N | 0.431183183 | None | None | N |
N/I | 0.1641 | likely_benign | 0.1497 | benign | -0.125 | Destabilizing | 0.007 | N | 0.487 | neutral | N | 0.431009825 | None | None | N |
N/K | 0.169 | likely_benign | 0.1635 | benign | 0.167 | Stabilizing | 0.008 | N | 0.177 | neutral | N | 0.429276242 | None | None | N |
N/L | 0.1388 | likely_benign | 0.1311 | benign | -0.125 | Destabilizing | 0.004 | N | 0.42 | neutral | None | None | None | None | N |
N/M | 0.2115 | likely_benign | 0.1994 | benign | 0.35 | Stabilizing | 0.245 | N | 0.517 | neutral | None | None | None | None | N |
N/P | 0.2199 | likely_benign | 0.2069 | benign | -0.242 | Destabilizing | None | N | 0.22 | neutral | None | None | None | None | N |
N/Q | 0.2123 | likely_benign | 0.2092 | benign | -0.396 | Destabilizing | 0.018 | N | 0.226 | neutral | None | None | None | None | N |
N/R | 0.1694 | likely_benign | 0.1695 | benign | 0.232 | Stabilizing | 0.018 | N | 0.226 | neutral | None | None | None | None | N |
N/S | 0.0577 | likely_benign | 0.0581 | benign | -0.218 | Destabilizing | None | N | 0.116 | neutral | N | 0.390795211 | None | None | N |
N/T | 0.0594 | likely_benign | 0.0575 | benign | -0.075 | Destabilizing | None | N | 0.113 | neutral | N | 0.40051356 | None | None | N |
N/V | 0.1646 | likely_benign | 0.153 | benign | -0.242 | Destabilizing | 0.004 | N | 0.443 | neutral | None | None | None | None | N |
N/W | 0.6194 | likely_pathogenic | 0.6026 | pathogenic | -0.733 | Destabilizing | 0.788 | D | 0.505 | neutral | None | None | None | None | N |
N/Y | 0.1479 | likely_benign | 0.1373 | benign | -0.49 | Destabilizing | 0.065 | N | 0.511 | neutral | N | 0.4315299 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.