Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35641 | 107146;107147;107148 | chr2:178528830;178528829;178528828 | chr2:179393557;179393556;179393555 |
N2AB | 34000 | 102223;102224;102225 | chr2:178528830;178528829;178528828 | chr2:179393557;179393556;179393555 |
N2A | 33073 | 99442;99443;99444 | chr2:178528830;178528829;178528828 | chr2:179393557;179393556;179393555 |
N2B | 26576 | 79951;79952;79953 | chr2:178528830;178528829;178528828 | chr2:179393557;179393556;179393555 |
Novex-1 | 26701 | 80326;80327;80328 | chr2:178528830;178528829;178528828 | chr2:179393557;179393556;179393555 |
Novex-2 | 26768 | 80527;80528;80529 | chr2:178528830;178528829;178528828 | chr2:179393557;179393556;179393555 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/H | None | None | 0.999 | N | 0.633 | 0.371 | 0.302459207581 | gnomAD-4.0.0 | 2.73661E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59761E-06 | 0 | 0 |
N/K | None | None | 0.117 | N | 0.425 | 0.077 | 0.110078149338 | gnomAD-4.0.0 | 4.80129E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.75482E-04 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.734 | likely_pathogenic | 0.7867 | pathogenic | -0.391 | Destabilizing | 0.983 | D | 0.571 | neutral | None | None | None | None | I |
N/C | 0.7905 | likely_pathogenic | 0.8199 | pathogenic | 0.27 | Stabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | I |
N/D | 0.2434 | likely_benign | 0.2866 | benign | 0.345 | Stabilizing | 0.977 | D | 0.605 | neutral | N | 0.460998218 | None | None | I |
N/E | 0.8026 | likely_pathogenic | 0.8441 | pathogenic | 0.318 | Stabilizing | 0.966 | D | 0.613 | neutral | None | None | None | None | I |
N/F | 0.9467 | likely_pathogenic | 0.9637 | pathogenic | -0.735 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | I |
N/G | 0.4805 | ambiguous | 0.5269 | ambiguous | -0.569 | Destabilizing | 0.983 | D | 0.582 | neutral | None | None | None | None | I |
N/H | 0.3077 | likely_benign | 0.3529 | ambiguous | -0.561 | Destabilizing | 0.999 | D | 0.633 | neutral | N | 0.466892401 | None | None | I |
N/I | 0.9381 | likely_pathogenic | 0.9557 | pathogenic | -0.01 | Destabilizing | 0.997 | D | 0.693 | prob.neutral | N | 0.467239118 | None | None | I |
N/K | 0.6959 | likely_pathogenic | 0.7476 | pathogenic | 0.181 | Stabilizing | 0.117 | N | 0.425 | neutral | N | 0.46602561 | None | None | I |
N/L | 0.798 | likely_pathogenic | 0.8387 | pathogenic | -0.01 | Destabilizing | 0.995 | D | 0.637 | neutral | None | None | None | None | I |
N/M | 0.8835 | likely_pathogenic | 0.9133 | pathogenic | 0.292 | Stabilizing | 1.0 | D | 0.623 | neutral | None | None | None | None | I |
N/P | 0.9786 | likely_pathogenic | 0.9843 | pathogenic | -0.11 | Destabilizing | 0.998 | D | 0.629 | neutral | None | None | None | None | I |
N/Q | 0.7223 | likely_pathogenic | 0.7592 | pathogenic | -0.336 | Destabilizing | 0.995 | D | 0.644 | neutral | None | None | None | None | I |
N/R | 0.6838 | likely_pathogenic | 0.7226 | pathogenic | 0.194 | Stabilizing | 0.99 | D | 0.609 | neutral | None | None | None | None | I |
N/S | 0.1899 | likely_benign | 0.2027 | benign | -0.167 | Destabilizing | 0.977 | D | 0.567 | neutral | N | 0.466198968 | None | None | I |
N/T | 0.6978 | likely_pathogenic | 0.7438 | pathogenic | -0.039 | Destabilizing | 0.977 | D | 0.599 | neutral | N | 0.466892401 | None | None | I |
N/V | 0.9316 | likely_pathogenic | 0.9503 | pathogenic | -0.11 | Destabilizing | 0.998 | D | 0.677 | prob.neutral | None | None | None | None | I |
N/W | 0.966 | likely_pathogenic | 0.9743 | pathogenic | -0.685 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | I |
N/Y | 0.5553 | ambiguous | 0.6019 | pathogenic | -0.421 | Destabilizing | 0.999 | D | 0.641 | neutral | N | 0.467239118 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.