Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35642 | 107149;107150;107151 | chr2:178528827;178528826;178528825 | chr2:179393554;179393553;179393552 |
N2AB | 34001 | 102226;102227;102228 | chr2:178528827;178528826;178528825 | chr2:179393554;179393553;179393552 |
N2A | 33074 | 99445;99446;99447 | chr2:178528827;178528826;178528825 | chr2:179393554;179393553;179393552 |
N2B | 26577 | 79954;79955;79956 | chr2:178528827;178528826;178528825 | chr2:179393554;179393553;179393552 |
Novex-1 | 26702 | 80329;80330;80331 | chr2:178528827;178528826;178528825 | chr2:179393554;179393553;179393552 |
Novex-2 | 26769 | 80530;80531;80532 | chr2:178528827;178528826;178528825 | chr2:179393554;179393553;179393552 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | rs1553480410 | None | 1.0 | N | 0.594 | 0.59 | 0.396645960531 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.464 | ambiguous | 0.4759 | ambiguous | -0.353 | Destabilizing | 1.0 | D | 0.486 | neutral | N | 0.470532926 | None | None | I |
G/C | 0.7188 | likely_pathogenic | 0.7419 | pathogenic | -1.065 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | N | 0.47122636 | None | None | I |
G/D | 0.2755 | likely_benign | 0.2781 | benign | -0.752 | Destabilizing | 1.0 | D | 0.594 | neutral | N | 0.468452626 | None | None | I |
G/E | 0.4284 | ambiguous | 0.446 | ambiguous | -0.912 | Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | I |
G/F | 0.9589 | likely_pathogenic | 0.9608 | pathogenic | -1.072 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | I |
G/H | 0.7048 | likely_pathogenic | 0.6986 | pathogenic | -0.412 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | I |
G/I | 0.917 | likely_pathogenic | 0.9218 | pathogenic | -0.583 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
G/K | 0.6621 | likely_pathogenic | 0.6723 | pathogenic | -0.869 | Destabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | I |
G/L | 0.923 | likely_pathogenic | 0.9223 | pathogenic | -0.583 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | I |
G/M | 0.9165 | likely_pathogenic | 0.9133 | pathogenic | -0.712 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | I |
G/N | 0.3836 | ambiguous | 0.3763 | ambiguous | -0.601 | Destabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | I |
G/P | 0.9959 | likely_pathogenic | 0.9963 | pathogenic | -0.48 | Destabilizing | 1.0 | D | 0.67 | neutral | None | None | None | None | I |
G/Q | 0.5748 | likely_pathogenic | 0.5706 | pathogenic | -0.879 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | I |
G/R | 0.5082 | ambiguous | 0.5147 | ambiguous | -0.388 | Destabilizing | 1.0 | D | 0.671 | neutral | N | 0.470359568 | None | None | I |
G/S | 0.1833 | likely_benign | 0.1789 | benign | -0.725 | Destabilizing | 1.0 | D | 0.655 | neutral | N | 0.469492776 | None | None | I |
G/T | 0.6115 | likely_pathogenic | 0.613 | pathogenic | -0.821 | Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | I |
G/V | 0.8588 | likely_pathogenic | 0.8662 | pathogenic | -0.48 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | N | 0.47122636 | None | None | I |
G/W | 0.8842 | likely_pathogenic | 0.8858 | pathogenic | -1.174 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | I |
G/Y | 0.8728 | likely_pathogenic | 0.8781 | pathogenic | -0.876 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.