Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35647 | 107164;107165;107166 | chr2:178528812;178528811;178528810 | chr2:179393539;179393538;179393537 |
N2AB | 34006 | 102241;102242;102243 | chr2:178528812;178528811;178528810 | chr2:179393539;179393538;179393537 |
N2A | 33079 | 99460;99461;99462 | chr2:178528812;178528811;178528810 | chr2:179393539;179393538;179393537 |
N2B | 26582 | 79969;79970;79971 | chr2:178528812;178528811;178528810 | chr2:179393539;179393538;179393537 |
Novex-1 | 26707 | 80344;80345;80346 | chr2:178528812;178528811;178528810 | chr2:179393539;179393538;179393537 |
Novex-2 | 26774 | 80545;80546;80547 | chr2:178528812;178528811;178528810 | chr2:179393539;179393538;179393537 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | None | None | 0.999 | N | 0.494 | 0.289 | 0.362758974969 | gnomAD-4.0.0 | 2.05272E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69845E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.4278 | ambiguous | 0.3851 | ambiguous | -0.559 | Destabilizing | 1.0 | D | 0.591 | neutral | None | None | None | None | N |
N/C | 0.7337 | likely_pathogenic | 0.688 | pathogenic | 0.252 | Stabilizing | 1.0 | D | 0.641 | neutral | None | None | None | None | N |
N/D | 0.2213 | likely_benign | 0.1984 | benign | 0.406 | Stabilizing | 0.999 | D | 0.531 | neutral | N | 0.483014726 | None | None | N |
N/E | 0.6761 | likely_pathogenic | 0.6241 | pathogenic | 0.399 | Stabilizing | 0.999 | D | 0.578 | neutral | None | None | None | None | N |
N/F | 0.8557 | likely_pathogenic | 0.8317 | pathogenic | -0.837 | Destabilizing | 1.0 | D | 0.648 | neutral | None | None | None | None | N |
N/G | 0.4855 | ambiguous | 0.4475 | ambiguous | -0.76 | Destabilizing | 0.999 | D | 0.5 | neutral | None | None | None | None | N |
N/H | 0.2922 | likely_benign | 0.254 | benign | -0.67 | Destabilizing | 1.0 | D | 0.581 | neutral | N | 0.483881518 | None | None | N |
N/I | 0.5362 | ambiguous | 0.4991 | ambiguous | -0.105 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | N | 0.483708159 | None | None | N |
N/K | 0.6281 | likely_pathogenic | 0.5952 | pathogenic | 0.16 | Stabilizing | 1.0 | D | 0.582 | neutral | N | 0.482321293 | None | None | N |
N/L | 0.5339 | ambiguous | 0.4998 | ambiguous | -0.105 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
N/M | 0.726 | likely_pathogenic | 0.6776 | pathogenic | 0.241 | Stabilizing | 1.0 | D | 0.586 | neutral | None | None | None | None | N |
N/P | 0.4961 | ambiguous | 0.4833 | ambiguous | -0.229 | Destabilizing | 1.0 | D | 0.654 | neutral | None | None | None | None | N |
N/Q | 0.6674 | likely_pathogenic | 0.6185 | pathogenic | -0.336 | Destabilizing | 1.0 | D | 0.597 | neutral | None | None | None | None | N |
N/R | 0.6559 | likely_pathogenic | 0.6172 | pathogenic | 0.181 | Stabilizing | 1.0 | D | 0.63 | neutral | None | None | None | None | N |
N/S | 0.12 | likely_benign | 0.1099 | benign | -0.249 | Destabilizing | 0.999 | D | 0.494 | neutral | N | 0.479894276 | None | None | N |
N/T | 0.3386 | likely_benign | 0.298 | benign | -0.087 | Destabilizing | 0.999 | D | 0.576 | neutral | N | 0.482668009 | None | None | N |
N/V | 0.5274 | ambiguous | 0.4776 | ambiguous | -0.229 | Destabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | N |
N/W | 0.9525 | likely_pathogenic | 0.9398 | pathogenic | -0.741 | Destabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | N |
N/Y | 0.4043 | ambiguous | 0.3684 | ambiguous | -0.494 | Destabilizing | 1.0 | D | 0.625 | neutral | N | 0.484054876 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.