Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35648 | 107167;107168;107169 | chr2:178528809;178528808;178528807 | chr2:179393536;179393535;179393534 |
N2AB | 34007 | 102244;102245;102246 | chr2:178528809;178528808;178528807 | chr2:179393536;179393535;179393534 |
N2A | 33080 | 99463;99464;99465 | chr2:178528809;178528808;178528807 | chr2:179393536;179393535;179393534 |
N2B | 26583 | 79972;79973;79974 | chr2:178528809;178528808;178528807 | chr2:179393536;179393535;179393534 |
Novex-1 | 26708 | 80347;80348;80349 | chr2:178528809;178528808;178528807 | chr2:179393536;179393535;179393534 |
Novex-2 | 26775 | 80548;80549;80550 | chr2:178528809;178528808;178528807 | chr2:179393536;179393535;179393534 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 1.0 | N | 0.719 | 0.52 | 0.278968121808 | gnomAD-4.0.0 | 2.05272E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.03931E-05 | None | 0 | 0 | 8.99493E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1762 | likely_benign | 0.1651 | benign | -0.656 | Destabilizing | 0.997 | D | 0.468 | neutral | N | 0.465158818 | None | None | N |
S/C | 0.2969 | likely_benign | 0.2546 | benign | -0.337 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | N | 0.466372326 | None | None | N |
S/D | 0.578 | likely_pathogenic | 0.5597 | ambiguous | 0.235 | Stabilizing | 0.999 | D | 0.618 | neutral | None | None | None | None | N |
S/E | 0.8228 | likely_pathogenic | 0.8018 | pathogenic | 0.215 | Stabilizing | 0.999 | D | 0.605 | neutral | None | None | None | None | N |
S/F | 0.6763 | likely_pathogenic | 0.6305 | pathogenic | -0.891 | Destabilizing | 1.0 | D | 0.75 | deleterious | N | 0.466198968 | None | None | N |
S/G | 0.1649 | likely_benign | 0.1458 | benign | -0.885 | Destabilizing | 0.999 | D | 0.522 | neutral | None | None | None | None | N |
S/H | 0.6616 | likely_pathogenic | 0.6071 | pathogenic | -1.328 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
S/I | 0.6462 | likely_pathogenic | 0.5899 | pathogenic | -0.161 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | N |
S/K | 0.8949 | likely_pathogenic | 0.8774 | pathogenic | -0.548 | Destabilizing | 0.999 | D | 0.609 | neutral | None | None | None | None | N |
S/L | 0.3079 | likely_benign | 0.2646 | benign | -0.161 | Destabilizing | 1.0 | D | 0.678 | prob.neutral | None | None | None | None | N |
S/M | 0.533 | ambiguous | 0.4625 | ambiguous | 0.064 | Stabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
S/N | 0.2789 | likely_benign | 0.2628 | benign | -0.408 | Destabilizing | 0.999 | D | 0.591 | neutral | None | None | None | None | N |
S/P | 0.8981 | likely_pathogenic | 0.8998 | pathogenic | -0.292 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | N | 0.465678893 | None | None | N |
S/Q | 0.807 | likely_pathogenic | 0.7754 | pathogenic | -0.538 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
S/R | 0.8372 | likely_pathogenic | 0.8244 | pathogenic | -0.467 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
S/T | 0.1253 | likely_benign | 0.1095 | benign | -0.488 | Destabilizing | 0.999 | D | 0.486 | neutral | N | 0.464638743 | None | None | N |
S/V | 0.6013 | likely_pathogenic | 0.5384 | ambiguous | -0.292 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
S/W | 0.7642 | likely_pathogenic | 0.7338 | pathogenic | -0.865 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
S/Y | 0.5805 | likely_pathogenic | 0.5406 | ambiguous | -0.604 | Destabilizing | 1.0 | D | 0.752 | deleterious | N | 0.466198968 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.