Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35661 | 107206;107207;107208 | chr2:178528770;178528769;178528768 | chr2:179393497;179393496;179393495 |
N2AB | 34020 | 102283;102284;102285 | chr2:178528770;178528769;178528768 | chr2:179393497;179393496;179393495 |
N2A | 33093 | 99502;99503;99504 | chr2:178528770;178528769;178528768 | chr2:179393497;179393496;179393495 |
N2B | 26596 | 80011;80012;80013 | chr2:178528770;178528769;178528768 | chr2:179393497;179393496;179393495 |
Novex-1 | 26721 | 80386;80387;80388 | chr2:178528770;178528769;178528768 | chr2:179393497;179393496;179393495 |
Novex-2 | 26788 | 80587;80588;80589 | chr2:178528770;178528769;178528768 | chr2:179393497;179393496;179393495 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs747649004 | 0.175 | 0.967 | N | 0.659 | 0.501 | 0.510172456258 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 9.34E-05 | 0 | 0 |
T/I | rs747649004 | 0.175 | 0.967 | N | 0.659 | 0.501 | 0.510172456258 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 9.43E-05 | 0 | 0 | 0 | 0 |
T/I | rs747649004 | 0.175 | 0.967 | N | 0.659 | 0.501 | 0.510172456258 | gnomAD-4.0.0 | 6.57462E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 9.43396E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1878 | likely_benign | 0.1888 | benign | -1.346 | Destabilizing | 0.025 | N | 0.489 | neutral | N | 0.482692226 | None | None | N |
T/C | 0.7461 | likely_pathogenic | 0.7752 | pathogenic | -1.217 | Destabilizing | 0.997 | D | 0.684 | prob.neutral | None | None | None | None | N |
T/D | 0.7108 | likely_pathogenic | 0.7384 | pathogenic | -1.81 | Destabilizing | 0.95 | D | 0.599 | neutral | None | None | None | None | N |
T/E | 0.5257 | ambiguous | 0.5527 | ambiguous | -1.619 | Destabilizing | 0.975 | D | 0.595 | neutral | None | None | None | None | N |
T/F | 0.4 | ambiguous | 0.4275 | ambiguous | -1.085 | Destabilizing | 0.987 | D | 0.746 | deleterious | None | None | None | None | N |
T/G | 0.6105 | likely_pathogenic | 0.601 | pathogenic | -1.737 | Destabilizing | 0.845 | D | 0.575 | neutral | None | None | None | None | N |
T/H | 0.4471 | ambiguous | 0.4677 | ambiguous | -1.814 | Destabilizing | 0.997 | D | 0.742 | deleterious | None | None | None | None | N |
T/I | 0.2678 | likely_benign | 0.2898 | benign | -0.323 | Destabilizing | 0.967 | D | 0.659 | neutral | N | 0.483732376 | None | None | N |
T/K | 0.3763 | ambiguous | 0.406 | ambiguous | -0.736 | Destabilizing | 0.975 | D | 0.619 | neutral | None | None | None | None | N |
T/L | 0.1961 | likely_benign | 0.2009 | benign | -0.323 | Destabilizing | 0.845 | D | 0.555 | neutral | None | None | None | None | N |
T/M | 0.1341 | likely_benign | 0.1359 | benign | -0.332 | Destabilizing | 0.999 | D | 0.684 | prob.neutral | None | None | None | None | N |
T/N | 0.2536 | likely_benign | 0.2626 | benign | -1.44 | Destabilizing | 0.204 | N | 0.438 | neutral | N | 0.46462654 | None | None | N |
T/P | 0.598 | likely_pathogenic | 0.6773 | pathogenic | -0.634 | Destabilizing | 0.983 | D | 0.662 | neutral | N | 0.483732376 | None | None | N |
T/Q | 0.4131 | ambiguous | 0.4129 | ambiguous | -1.286 | Destabilizing | 0.987 | D | 0.669 | neutral | None | None | None | None | N |
T/R | 0.3415 | ambiguous | 0.3693 | ambiguous | -0.849 | Destabilizing | 0.987 | D | 0.662 | neutral | None | None | None | None | N |
T/S | 0.2268 | likely_benign | 0.2259 | benign | -1.651 | Destabilizing | 0.805 | D | 0.539 | neutral | N | 0.480785284 | None | None | N |
T/V | 0.2451 | likely_benign | 0.255 | benign | -0.634 | Destabilizing | 0.845 | D | 0.539 | neutral | None | None | None | None | N |
T/W | 0.788 | likely_pathogenic | 0.7942 | pathogenic | -1.194 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | N |
T/Y | 0.4365 | ambiguous | 0.4487 | ambiguous | -0.828 | Destabilizing | 0.996 | D | 0.751 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.