Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35665 | 107218;107219;107220 | chr2:178528758;178528757;178528756 | chr2:179393485;179393484;179393483 |
N2AB | 34024 | 102295;102296;102297 | chr2:178528758;178528757;178528756 | chr2:179393485;179393484;179393483 |
N2A | 33097 | 99514;99515;99516 | chr2:178528758;178528757;178528756 | chr2:179393485;179393484;179393483 |
N2B | 26600 | 80023;80024;80025 | chr2:178528758;178528757;178528756 | chr2:179393485;179393484;179393483 |
Novex-1 | 26725 | 80398;80399;80400 | chr2:178528758;178528757;178528756 | chr2:179393485;179393484;179393483 |
Novex-2 | 26792 | 80599;80600;80601 | chr2:178528758;178528757;178528756 | chr2:179393485;179393484;179393483 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs746841189 | -0.269 | 0.001 | N | 0.228 | 0.085 | 0.221019684889 | gnomAD-2.1.1 | 7.16E-06 | None | None | None | None | N | None | 8.28E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/R | rs746841189 | -0.269 | 0.001 | N | 0.228 | 0.085 | 0.221019684889 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 7.24E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/R | rs746841189 | -0.269 | 0.001 | N | 0.228 | 0.085 | 0.221019684889 | gnomAD-4.0.0 | 5.12888E-06 | None | None | None | None | N | None | 6.76361E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6294 | likely_pathogenic | 0.5564 | ambiguous | -0.332 | Destabilizing | 0.272 | N | 0.609 | neutral | None | None | None | None | N |
K/C | 0.8683 | likely_pathogenic | 0.8308 | pathogenic | -0.457 | Destabilizing | 0.968 | D | 0.722 | prob.delet. | None | None | None | None | N |
K/D | 0.7921 | likely_pathogenic | 0.776 | pathogenic | -0.128 | Destabilizing | 0.567 | D | 0.667 | neutral | None | None | None | None | N |
K/E | 0.3296 | likely_benign | 0.302 | benign | -0.049 | Destabilizing | 0.124 | N | 0.525 | neutral | N | 0.478878343 | None | None | N |
K/F | 0.8766 | likely_pathogenic | 0.8371 | pathogenic | -0.107 | Destabilizing | 0.567 | D | 0.732 | prob.delet. | None | None | None | None | N |
K/G | 0.66 | likely_pathogenic | 0.6038 | pathogenic | -0.671 | Destabilizing | 0.272 | N | 0.671 | neutral | None | None | None | None | N |
K/H | 0.4377 | ambiguous | 0.3771 | ambiguous | -1.064 | Destabilizing | 0.909 | D | 0.693 | prob.neutral | None | None | None | None | N |
K/I | 0.5703 | likely_pathogenic | 0.5024 | ambiguous | 0.527 | Stabilizing | 0.396 | N | 0.679 | prob.neutral | None | None | None | None | N |
K/L | 0.5244 | ambiguous | 0.4575 | ambiguous | 0.527 | Stabilizing | 0.072 | N | 0.611 | neutral | None | None | None | None | N |
K/M | 0.418 | ambiguous | 0.3652 | ambiguous | 0.406 | Stabilizing | 0.025 | N | 0.427 | neutral | N | 0.462199523 | None | None | N |
K/N | 0.5738 | likely_pathogenic | 0.5448 | ambiguous | -0.294 | Destabilizing | 0.497 | N | 0.561 | neutral | N | 0.479745134 | None | None | N |
K/P | 0.8461 | likely_pathogenic | 0.8392 | pathogenic | 0.272 | Stabilizing | 0.726 | D | 0.711 | prob.delet. | None | None | None | None | N |
K/Q | 0.1927 | likely_benign | 0.1618 | benign | -0.435 | Destabilizing | 0.22 | N | 0.562 | neutral | N | 0.478358268 | None | None | N |
K/R | 0.1068 | likely_benign | 0.0932 | benign | -0.537 | Destabilizing | 0.001 | N | 0.228 | neutral | N | 0.479225059 | None | None | N |
K/S | 0.5967 | likely_pathogenic | 0.5492 | ambiguous | -0.898 | Destabilizing | 0.272 | N | 0.491 | neutral | None | None | None | None | N |
K/T | 0.3384 | likely_benign | 0.2953 | benign | -0.631 | Destabilizing | 0.22 | N | 0.649 | neutral | N | 0.479571776 | None | None | N |
K/V | 0.6172 | likely_pathogenic | 0.5343 | ambiguous | 0.272 | Stabilizing | 0.157 | N | 0.664 | neutral | None | None | None | None | N |
K/W | 0.8716 | likely_pathogenic | 0.83 | pathogenic | 0.002 | Stabilizing | 0.968 | D | 0.735 | prob.delet. | None | None | None | None | N |
K/Y | 0.7595 | likely_pathogenic | 0.6979 | pathogenic | 0.304 | Stabilizing | 0.726 | D | 0.736 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.