Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35672 | 107239;107240;107241 | chr2:178528737;178528736;178528735 | chr2:179393464;179393463;179393462 |
N2AB | 34031 | 102316;102317;102318 | chr2:178528737;178528736;178528735 | chr2:179393464;179393463;179393462 |
N2A | 33104 | 99535;99536;99537 | chr2:178528737;178528736;178528735 | chr2:179393464;179393463;179393462 |
N2B | 26607 | 80044;80045;80046 | chr2:178528737;178528736;178528735 | chr2:179393464;179393463;179393462 |
Novex-1 | 26732 | 80419;80420;80421 | chr2:178528737;178528736;178528735 | chr2:179393464;179393463;179393462 |
Novex-2 | 26799 | 80620;80621;80622 | chr2:178528737;178528736;178528735 | chr2:179393464;179393463;179393462 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs753906444 | -0.663 | 0.822 | N | 0.471 | 0.072 | 0.190952846119 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.28E-05 | None | 0 | 0 | 0 |
E/D | rs753906444 | -0.663 | 0.822 | N | 0.471 | 0.072 | 0.190952846119 | gnomAD-4.0.0 | 1.59256E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4339E-05 | 0 |
E/K | None | None | 0.698 | N | 0.513 | 0.116 | 0.29385284311 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1584 | likely_benign | 0.1578 | benign | -0.744 | Destabilizing | 0.014 | N | 0.298 | neutral | N | 0.474549958 | None | None | N |
E/C | 0.9457 | likely_pathogenic | 0.9362 | pathogenic | -0.097 | Destabilizing | 0.994 | D | 0.645 | neutral | None | None | None | None | N |
E/D | 0.4359 | ambiguous | 0.4374 | ambiguous | -0.567 | Destabilizing | 0.822 | D | 0.471 | neutral | N | 0.476110183 | None | None | N |
E/F | 0.8875 | likely_pathogenic | 0.9071 | pathogenic | -0.504 | Destabilizing | 0.978 | D | 0.646 | neutral | None | None | None | None | N |
E/G | 0.2227 | likely_benign | 0.2307 | benign | -1.006 | Destabilizing | 0.698 | D | 0.522 | neutral | N | 0.4764569 | None | None | N |
E/H | 0.6763 | likely_pathogenic | 0.6976 | pathogenic | -0.584 | Destabilizing | 0.978 | D | 0.537 | neutral | None | None | None | None | N |
E/I | 0.5799 | likely_pathogenic | 0.5863 | pathogenic | -0.058 | Destabilizing | 0.956 | D | 0.641 | neutral | None | None | None | None | N |
E/K | 0.136 | likely_benign | 0.1468 | benign | 0.099 | Stabilizing | 0.698 | D | 0.513 | neutral | N | 0.475243392 | None | None | N |
E/L | 0.628 | likely_pathogenic | 0.6474 | pathogenic | -0.058 | Destabilizing | 0.754 | D | 0.558 | neutral | None | None | None | None | N |
E/M | 0.5765 | likely_pathogenic | 0.5803 | pathogenic | 0.319 | Stabilizing | 0.994 | D | 0.629 | neutral | None | None | None | None | N |
E/N | 0.4934 | ambiguous | 0.4939 | ambiguous | -0.333 | Destabilizing | 0.86 | D | 0.489 | neutral | None | None | None | None | N |
E/P | 0.9347 | likely_pathogenic | 0.9495 | pathogenic | -0.267 | Destabilizing | 0.978 | D | 0.593 | neutral | None | None | None | None | N |
E/Q | 0.1378 | likely_benign | 0.1395 | benign | -0.271 | Destabilizing | 0.058 | N | 0.148 | neutral | N | 0.44648071 | None | None | N |
E/R | 0.2423 | likely_benign | 0.2655 | benign | 0.231 | Stabilizing | 0.754 | D | 0.491 | neutral | None | None | None | None | N |
E/S | 0.2569 | likely_benign | 0.2571 | benign | -0.536 | Destabilizing | 0.754 | D | 0.494 | neutral | None | None | None | None | N |
E/T | 0.3149 | likely_benign | 0.3107 | benign | -0.313 | Destabilizing | 0.86 | D | 0.527 | neutral | None | None | None | None | N |
E/V | 0.3859 | ambiguous | 0.3875 | ambiguous | -0.267 | Destabilizing | 0.698 | D | 0.541 | neutral | N | 0.476283542 | None | None | N |
E/W | 0.9604 | likely_pathogenic | 0.968 | pathogenic | -0.272 | Destabilizing | 0.998 | D | 0.671 | neutral | None | None | None | None | N |
E/Y | 0.8369 | likely_pathogenic | 0.8541 | pathogenic | -0.24 | Destabilizing | 0.993 | D | 0.639 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.