Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35676 | 107251;107252;107253 | chr2:178528725;178528724;178528723 | chr2:179393452;179393451;179393450 |
N2AB | 34035 | 102328;102329;102330 | chr2:178528725;178528724;178528723 | chr2:179393452;179393451;179393450 |
N2A | 33108 | 99547;99548;99549 | chr2:178528725;178528724;178528723 | chr2:179393452;179393451;179393450 |
N2B | 26611 | 80056;80057;80058 | chr2:178528725;178528724;178528723 | chr2:179393452;179393451;179393450 |
Novex-1 | 26736 | 80431;80432;80433 | chr2:178528725;178528724;178528723 | chr2:179393452;179393451;179393450 |
Novex-2 | 26803 | 80632;80633;80634 | chr2:178528725;178528724;178528723 | chr2:179393452;179393451;179393450 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs764714213 | 0.399 | 0.497 | N | 0.722 | 0.199 | 0.320256813643 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 0 | 1.16394E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/I | rs764714213 | 0.399 | 0.497 | N | 0.722 | 0.199 | 0.320256813643 | gnomAD-4.0.0 | 6.36772E-06 | None | None | None | None | N | None | 0 | 9.15499E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1627 | likely_benign | 0.1879 | benign | -1.121 | Destabilizing | 0.055 | N | 0.662 | neutral | N | 0.465332176 | None | None | N |
T/C | 0.7328 | likely_pathogenic | 0.7771 | pathogenic | -0.673 | Destabilizing | 0.909 | D | 0.705 | prob.neutral | None | None | None | None | N |
T/D | 0.7504 | likely_pathogenic | 0.8144 | pathogenic | -1.607 | Destabilizing | 0.157 | N | 0.707 | prob.neutral | None | None | None | None | N |
T/E | 0.5713 | likely_pathogenic | 0.6501 | pathogenic | -1.368 | Destabilizing | 0.157 | N | 0.702 | prob.neutral | None | None | None | None | N |
T/F | 0.4601 | ambiguous | 0.5282 | ambiguous | -0.736 | Destabilizing | 0.726 | D | 0.763 | deleterious | None | None | None | None | N |
T/G | 0.5514 | ambiguous | 0.6114 | pathogenic | -1.551 | Destabilizing | 0.157 | N | 0.713 | prob.delet. | None | None | None | None | N |
T/H | 0.4449 | ambiguous | 0.5286 | ambiguous | -1.636 | Destabilizing | 0.909 | D | 0.739 | prob.delet. | None | None | None | None | N |
T/I | 0.3409 | ambiguous | 0.3642 | ambiguous | 0.023 | Stabilizing | 0.497 | N | 0.722 | prob.delet. | N | 0.46498546 | None | None | N |
T/K | 0.5163 | ambiguous | 0.5961 | pathogenic | -0.298 | Destabilizing | 0.157 | N | 0.703 | prob.neutral | None | None | None | None | N |
T/L | 0.237 | likely_benign | 0.2523 | benign | 0.023 | Stabilizing | 0.272 | N | 0.709 | prob.delet. | None | None | None | None | N |
T/M | 0.1808 | likely_benign | 0.1933 | benign | -0.146 | Destabilizing | 0.968 | D | 0.707 | prob.neutral | None | None | None | None | N |
T/N | 0.288 | likely_benign | 0.3578 | ambiguous | -1.103 | Destabilizing | 0.331 | N | 0.689 | prob.neutral | N | 0.46602561 | None | None | N |
T/P | 0.8169 | likely_pathogenic | 0.8565 | pathogenic | -0.329 | Destabilizing | 0.001 | N | 0.431 | neutral | N | 0.466198968 | None | None | N |
T/Q | 0.4214 | ambiguous | 0.4864 | ambiguous | -0.774 | Destabilizing | 0.567 | D | 0.728 | prob.delet. | None | None | None | None | N |
T/R | 0.4085 | ambiguous | 0.4892 | ambiguous | -0.664 | Destabilizing | 0.567 | D | 0.73 | prob.delet. | None | None | None | None | N |
T/S | 0.1784 | likely_benign | 0.2109 | benign | -1.287 | Destabilizing | 0.001 | N | 0.466 | neutral | N | 0.464292026 | None | None | N |
T/V | 0.2939 | likely_benign | 0.3047 | benign | -0.329 | Destabilizing | 0.272 | N | 0.653 | neutral | None | None | None | None | N |
T/W | 0.787 | likely_pathogenic | 0.8276 | pathogenic | -0.984 | Destabilizing | 0.968 | D | 0.742 | deleterious | None | None | None | None | N |
T/Y | 0.4679 | ambiguous | 0.5313 | ambiguous | -0.547 | Destabilizing | 0.726 | D | 0.761 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.