Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35738 | 107437;107438;107439 | chr2:178528539;178528538;178528537 | chr2:179393266;179393265;179393264 |
N2AB | 34097 | 102514;102515;102516 | chr2:178528539;178528538;178528537 | chr2:179393266;179393265;179393264 |
N2A | 33170 | 99733;99734;99735 | chr2:178528539;178528538;178528537 | chr2:179393266;179393265;179393264 |
N2B | 26673 | 80242;80243;80244 | chr2:178528539;178528538;178528537 | chr2:179393266;179393265;179393264 |
Novex-1 | 26798 | 80617;80618;80619 | chr2:178528539;178528538;178528537 | chr2:179393266;179393265;179393264 |
Novex-2 | 26865 | 80818;80819;80820 | chr2:178528539;178528538;178528537 | chr2:179393266;179393265;179393264 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | None | None | 0.117 | N | 0.322 | 0.132 | 0.115124310173 | gnomAD-4.0.0 | 1.60895E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.89233E-06 | 0 | 0 |
N/S | rs774996138 | 0.26 | 0.027 | N | 0.385 | 0.157 | 0.112648838833 | gnomAD-2.1.1 | 1.23E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.001E-04 | None | 0 | 0 | 0 |
N/S | rs774996138 | 0.26 | 0.027 | N | 0.385 | 0.157 | 0.112648838833 | gnomAD-4.0.0 | 8.24405E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.40236E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.7234 | likely_pathogenic | 0.7071 | pathogenic | -0.716 | Destabilizing | 0.149 | N | 0.411 | neutral | None | None | None | None | N |
N/C | 0.807 | likely_pathogenic | 0.8132 | pathogenic | 0.206 | Stabilizing | 0.935 | D | 0.422 | neutral | None | None | None | None | N |
N/D | 0.1415 | likely_benign | 0.1268 | benign | 0.117 | Stabilizing | None | N | 0.167 | neutral | N | 0.375342103 | None | None | N |
N/E | 0.6524 | likely_pathogenic | 0.6171 | pathogenic | 0.147 | Stabilizing | 0.035 | N | 0.333 | neutral | None | None | None | None | N |
N/F | 0.9472 | likely_pathogenic | 0.9339 | pathogenic | -0.76 | Destabilizing | 0.791 | D | 0.413 | neutral | None | None | None | None | N |
N/G | 0.533 | ambiguous | 0.5032 | ambiguous | -0.979 | Destabilizing | 0.067 | N | 0.364 | neutral | None | None | None | None | N |
N/H | 0.4056 | ambiguous | 0.3745 | ambiguous | -0.834 | Destabilizing | 0.484 | N | 0.331 | neutral | N | 0.505680076 | None | None | N |
N/I | 0.8673 | likely_pathogenic | 0.8594 | pathogenic | -0.082 | Destabilizing | 0.484 | N | 0.423 | neutral | N | 0.463448157 | None | None | N |
N/K | 0.7534 | likely_pathogenic | 0.7154 | pathogenic | -0.097 | Destabilizing | 0.117 | N | 0.322 | neutral | N | 0.489190471 | None | None | N |
N/L | 0.8122 | likely_pathogenic | 0.7929 | pathogenic | -0.082 | Destabilizing | 0.262 | N | 0.43 | neutral | None | None | None | None | N |
N/M | 0.8261 | likely_pathogenic | 0.8101 | pathogenic | 0.309 | Stabilizing | 0.935 | D | 0.407 | neutral | None | None | None | None | N |
N/P | 0.9894 | likely_pathogenic | 0.9895 | pathogenic | -0.264 | Destabilizing | 0.555 | D | 0.399 | neutral | None | None | None | None | N |
N/Q | 0.7242 | likely_pathogenic | 0.6886 | pathogenic | -0.53 | Destabilizing | 0.149 | N | 0.337 | neutral | None | None | None | None | N |
N/R | 0.8071 | likely_pathogenic | 0.7737 | pathogenic | -0.104 | Destabilizing | 0.38 | N | 0.331 | neutral | None | None | None | None | N |
N/S | 0.2351 | likely_benign | 0.2312 | benign | -0.501 | Destabilizing | 0.027 | N | 0.385 | neutral | N | 0.483437935 | None | None | N |
N/T | 0.6299 | likely_pathogenic | 0.6298 | pathogenic | -0.291 | Destabilizing | 0.117 | N | 0.333 | neutral | N | 0.459155743 | None | None | N |
N/V | 0.8561 | likely_pathogenic | 0.8519 | pathogenic | -0.264 | Destabilizing | 0.555 | D | 0.412 | neutral | None | None | None | None | N |
N/W | 0.9665 | likely_pathogenic | 0.9613 | pathogenic | -0.603 | Destabilizing | 0.935 | D | 0.525 | neutral | None | None | None | None | N |
N/Y | 0.5074 | ambiguous | 0.4744 | ambiguous | -0.401 | Destabilizing | 0.741 | D | 0.405 | neutral | N | 0.474804463 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.