Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35748 | 107467;107468;107469 | chr2:178528409;178528408;178528407 | chr2:179393136;179393135;179393134 |
N2AB | 34107 | 102544;102545;102546 | chr2:178528409;178528408;178528407 | chr2:179393136;179393135;179393134 |
N2A | 33180 | 99763;99764;99765 | chr2:178528409;178528408;178528407 | chr2:179393136;179393135;179393134 |
N2B | 26683 | 80272;80273;80274 | chr2:178528409;178528408;178528407 | chr2:179393136;179393135;179393134 |
Novex-1 | 26808 | 80647;80648;80649 | chr2:178528409;178528408;178528407 | chr2:179393136;179393135;179393134 |
Novex-2 | 26875 | 80848;80849;80850 | chr2:178528409;178528408;178528407 | chr2:179393136;179393135;179393134 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.024 | N | 0.463 | 0.318 | 0.515149029962 | gnomAD-4.0.0 | 1.59286E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43968E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2562 | likely_benign | 0.2652 | benign | -1.571 | Destabilizing | 0.024 | N | 0.463 | neutral | N | 0.486980538 | None | None | N |
V/C | 0.694 | likely_pathogenic | 0.6789 | pathogenic | -1.478 | Destabilizing | 0.628 | D | 0.639 | neutral | None | None | None | None | N |
V/D | 0.5684 | likely_pathogenic | 0.5331 | ambiguous | -0.956 | Destabilizing | 0.295 | N | 0.678 | prob.neutral | D | 0.531560821 | None | None | N |
V/E | 0.5 | ambiguous | 0.471 | ambiguous | -0.879 | Destabilizing | 0.356 | N | 0.675 | prob.neutral | None | None | None | None | N |
V/F | 0.1348 | likely_benign | 0.1185 | benign | -1.122 | Destabilizing | 0.055 | N | 0.635 | neutral | N | 0.467277269 | None | None | N |
V/G | 0.3608 | ambiguous | 0.3686 | ambiguous | -1.962 | Destabilizing | 0.106 | N | 0.683 | prob.neutral | N | 0.496120096 | None | None | N |
V/H | 0.5998 | likely_pathogenic | 0.5507 | ambiguous | -1.54 | Destabilizing | 0.864 | D | 0.647 | neutral | None | None | None | None | N |
V/I | 0.0584 | likely_benign | 0.0577 | benign | -0.569 | Destabilizing | None | N | 0.153 | neutral | N | 0.462967528 | None | None | N |
V/K | 0.4864 | ambiguous | 0.4528 | ambiguous | -1.158 | Destabilizing | 0.072 | N | 0.661 | neutral | None | None | None | None | N |
V/L | 0.1473 | likely_benign | 0.1411 | benign | -0.569 | Destabilizing | None | N | 0.154 | neutral | N | 0.495925308 | None | None | N |
V/M | 0.1164 | likely_benign | 0.1154 | benign | -0.701 | Destabilizing | 0.003 | N | 0.23 | neutral | None | None | None | None | N |
V/N | 0.3435 | ambiguous | 0.3211 | benign | -1.106 | Destabilizing | 0.628 | D | 0.689 | prob.neutral | None | None | None | None | N |
V/P | 0.8868 | likely_pathogenic | 0.8839 | pathogenic | -0.869 | Destabilizing | 0.628 | D | 0.656 | neutral | None | None | None | None | N |
V/Q | 0.4715 | ambiguous | 0.4351 | ambiguous | -1.133 | Destabilizing | 0.356 | N | 0.665 | neutral | None | None | None | None | N |
V/R | 0.4077 | ambiguous | 0.3664 | ambiguous | -0.885 | Destabilizing | 0.356 | N | 0.681 | prob.neutral | None | None | None | None | N |
V/S | 0.2982 | likely_benign | 0.3001 | benign | -1.825 | Destabilizing | 0.136 | N | 0.629 | neutral | None | None | None | None | N |
V/T | 0.2081 | likely_benign | 0.2093 | benign | -1.61 | Destabilizing | 0.072 | N | 0.536 | neutral | None | None | None | None | N |
V/W | 0.7559 | likely_pathogenic | 0.7357 | pathogenic | -1.324 | Destabilizing | 0.864 | D | 0.663 | neutral | None | None | None | None | N |
V/Y | 0.4509 | ambiguous | 0.4105 | ambiguous | -0.989 | Destabilizing | 0.356 | N | 0.672 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.