Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35758 | 107497;107498;107499 | chr2:178528379;178528378;178528377 | chr2:179393106;179393105;179393104 |
N2AB | 34117 | 102574;102575;102576 | chr2:178528379;178528378;178528377 | chr2:179393106;179393105;179393104 |
N2A | 33190 | 99793;99794;99795 | chr2:178528379;178528378;178528377 | chr2:179393106;179393105;179393104 |
N2B | 26693 | 80302;80303;80304 | chr2:178528379;178528378;178528377 | chr2:179393106;179393105;179393104 |
Novex-1 | 26818 | 80677;80678;80679 | chr2:178528379;178528378;178528377 | chr2:179393106;179393105;179393104 |
Novex-2 | 26885 | 80878;80879;80880 | chr2:178528379;178528378;178528377 | chr2:179393106;179393105;179393104 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | rs1318791339 | -0.435 | 0.78 | N | 0.617 | 0.403 | 0.567569374525 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
S/C | rs1318791339 | -0.435 | 0.78 | N | 0.617 | 0.403 | 0.567569374525 | gnomAD-4.0.0 | 6.36402E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 5.73099E-05 | 0 |
S/F | None | None | 0.484 | N | 0.663 | 0.345 | 0.703042832254 | gnomAD-4.0.0 | 1.591E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8577E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0991 | likely_benign | 0.0986 | benign | -0.786 | Destabilizing | 0.027 | N | 0.497 | neutral | N | 0.487164495 | None | None | N |
S/C | 0.1524 | likely_benign | 0.1501 | benign | -0.42 | Destabilizing | 0.78 | D | 0.617 | neutral | N | 0.514284878 | None | None | N |
S/D | 0.5605 | ambiguous | 0.545 | ambiguous | -0.636 | Destabilizing | 0.001 | N | 0.317 | neutral | None | None | None | None | N |
S/E | 0.6002 | likely_pathogenic | 0.5808 | pathogenic | -0.472 | Destabilizing | 0.081 | N | 0.6 | neutral | None | None | None | None | N |
S/F | 0.227 | likely_benign | 0.212 | benign | -0.742 | Destabilizing | 0.484 | N | 0.663 | neutral | N | 0.49723058 | None | None | N |
S/G | 0.146 | likely_benign | 0.1436 | benign | -1.175 | Destabilizing | 0.067 | N | 0.583 | neutral | None | None | None | None | N |
S/H | 0.318 | likely_benign | 0.3009 | benign | -1.512 | Destabilizing | 0.935 | D | 0.625 | neutral | None | None | None | None | N |
S/I | 0.1753 | likely_benign | 0.1678 | benign | 0.192 | Stabilizing | 0.235 | N | 0.668 | neutral | None | None | None | None | N |
S/K | 0.6488 | likely_pathogenic | 0.6206 | pathogenic | -0.057 | Destabilizing | 0.149 | N | 0.623 | neutral | None | None | None | None | N |
S/L | 0.122 | likely_benign | 0.123 | benign | 0.192 | Stabilizing | 0.081 | N | 0.643 | neutral | None | None | None | None | N |
S/M | 0.2097 | likely_benign | 0.2185 | benign | 0.189 | Stabilizing | 0.824 | D | 0.625 | neutral | None | None | None | None | N |
S/N | 0.1723 | likely_benign | 0.1619 | benign | -0.606 | Destabilizing | 0.149 | N | 0.604 | neutral | None | None | None | None | N |
S/P | 0.9343 | likely_pathogenic | 0.9253 | pathogenic | -0.098 | Destabilizing | 0.484 | N | 0.676 | prob.neutral | D | 0.525387694 | None | None | N |
S/Q | 0.4792 | ambiguous | 0.4687 | ambiguous | -0.416 | Destabilizing | 0.555 | D | 0.659 | neutral | None | None | None | None | N |
S/R | 0.5268 | ambiguous | 0.4892 | ambiguous | -0.415 | Destabilizing | 0.38 | N | 0.668 | neutral | None | None | None | None | N |
S/T | 0.0674 | likely_benign | 0.0705 | benign | -0.41 | Destabilizing | None | N | 0.241 | neutral | N | 0.475643249 | None | None | N |
S/V | 0.1941 | likely_benign | 0.1902 | benign | -0.098 | Destabilizing | 0.081 | N | 0.643 | neutral | None | None | None | None | N |
S/W | 0.4171 | ambiguous | 0.4044 | ambiguous | -0.878 | Destabilizing | 0.935 | D | 0.712 | prob.delet. | None | None | None | None | N |
S/Y | 0.2015 | likely_benign | 0.1891 | benign | -0.457 | Destabilizing | 0.484 | N | 0.64 | neutral | N | 0.502510499 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.