Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35764 | 107515;107516;107517 | chr2:178528361;178528360;178528359 | chr2:179393088;179393087;179393086 |
N2AB | 34123 | 102592;102593;102594 | chr2:178528361;178528360;178528359 | chr2:179393088;179393087;179393086 |
N2A | 33196 | 99811;99812;99813 | chr2:178528361;178528360;178528359 | chr2:179393088;179393087;179393086 |
N2B | 26699 | 80320;80321;80322 | chr2:178528361;178528360;178528359 | chr2:179393088;179393087;179393086 |
Novex-1 | 26824 | 80695;80696;80697 | chr2:178528361;178528360;178528359 | chr2:179393088;179393087;179393086 |
Novex-2 | 26891 | 80896;80897;80898 | chr2:178528361;178528360;178528359 | chr2:179393088;179393087;179393086 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | rs879048717 | -0.854 | 0.998 | N | 0.663 | 0.433 | 0.338592109245 | gnomAD-2.1.1 | 4.01E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.86E-06 | 0 |
A/S | rs879048717 | -0.854 | 0.998 | N | 0.663 | 0.433 | 0.338592109245 | gnomAD-4.0.0 | 1.71041E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.24855E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.7275 | likely_pathogenic | 0.7475 | pathogenic | -2.036 | Highly Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
A/D | 0.9733 | likely_pathogenic | 0.9773 | pathogenic | -2.831 | Highly Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
A/E | 0.9645 | likely_pathogenic | 0.9675 | pathogenic | -2.763 | Highly Destabilizing | 1.0 | D | 0.805 | deleterious | N | 0.510173956 | None | None | N |
A/F | 0.9211 | likely_pathogenic | 0.9223 | pathogenic | -1.244 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
A/G | 0.4199 | ambiguous | 0.416 | ambiguous | -1.56 | Destabilizing | 0.999 | D | 0.658 | neutral | N | 0.498564161 | None | None | N |
A/H | 0.9789 | likely_pathogenic | 0.9811 | pathogenic | -1.565 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | N |
A/I | 0.5222 | ambiguous | 0.5745 | pathogenic | -0.458 | Destabilizing | 0.994 | D | 0.725 | prob.delet. | None | None | None | None | N |
A/K | 0.9849 | likely_pathogenic | 0.987 | pathogenic | -1.537 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
A/L | 0.5857 | likely_pathogenic | 0.6014 | pathogenic | -0.458 | Destabilizing | 0.994 | D | 0.607 | neutral | None | None | None | None | N |
A/M | 0.7052 | likely_pathogenic | 0.725 | pathogenic | -0.756 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
A/N | 0.9125 | likely_pathogenic | 0.9258 | pathogenic | -1.765 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
A/P | 0.784 | likely_pathogenic | 0.8037 | pathogenic | -0.681 | Destabilizing | 1.0 | D | 0.785 | deleterious | N | 0.500240624 | None | None | N |
A/Q | 0.956 | likely_pathogenic | 0.9612 | pathogenic | -1.866 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
A/R | 0.9655 | likely_pathogenic | 0.9684 | pathogenic | -1.242 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
A/S | 0.2145 | likely_benign | 0.2409 | benign | -2.094 | Highly Destabilizing | 0.998 | D | 0.663 | neutral | N | 0.496314884 | None | None | N |
A/T | 0.1475 | likely_benign | 0.1588 | benign | -1.927 | Destabilizing | 0.996 | D | 0.727 | prob.delet. | N | 0.440288243 | None | None | N |
A/V | 0.2213 | likely_benign | 0.2414 | benign | -0.681 | Destabilizing | 0.884 | D | 0.387 | neutral | N | 0.373460244 | None | None | N |
A/W | 0.9941 | likely_pathogenic | 0.9947 | pathogenic | -1.693 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | N |
A/Y | 0.9749 | likely_pathogenic | 0.9758 | pathogenic | -1.253 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.