Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35769 | 107530;107531;107532 | chr2:178528346;178528345;178528344 | chr2:179393073;179393072;179393071 |
N2AB | 34128 | 102607;102608;102609 | chr2:178528346;178528345;178528344 | chr2:179393073;179393072;179393071 |
N2A | 33201 | 99826;99827;99828 | chr2:178528346;178528345;178528344 | chr2:179393073;179393072;179393071 |
N2B | 26704 | 80335;80336;80337 | chr2:178528346;178528345;178528344 | chr2:179393073;179393072;179393071 |
Novex-1 | 26829 | 80710;80711;80712 | chr2:178528346;178528345;178528344 | chr2:179393073;179393072;179393071 |
Novex-2 | 26896 | 80911;80912;80913 | chr2:178528346;178528345;178528344 | chr2:179393073;179393072;179393071 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | None | None | 0.934 | N | 0.481 | 0.437 | 0.346992582518 | gnomAD-4.0.0 | 4.10499E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49711E-06 | 0 | 1.6564E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1151 | likely_benign | 0.1056 | benign | -0.833 | Destabilizing | 0.525 | D | 0.441 | neutral | None | None | None | None | I |
S/C | 0.2804 | likely_benign | 0.2832 | benign | -0.532 | Destabilizing | 0.997 | D | 0.478 | neutral | N | 0.492902167 | None | None | I |
S/D | 0.8382 | likely_pathogenic | 0.8135 | pathogenic | 0.112 | Stabilizing | 0.842 | D | 0.381 | neutral | None | None | None | None | I |
S/E | 0.8667 | likely_pathogenic | 0.7984 | pathogenic | 0.069 | Stabilizing | 0.842 | D | 0.394 | neutral | None | None | None | None | I |
S/F | 0.6509 | likely_pathogenic | 0.5931 | pathogenic | -1.241 | Destabilizing | 0.949 | D | 0.578 | neutral | None | None | None | None | I |
S/G | 0.1609 | likely_benign | 0.151 | benign | -1.01 | Destabilizing | 0.801 | D | 0.404 | neutral | N | 0.509588039 | None | None | I |
S/H | 0.7774 | likely_pathogenic | 0.7517 | pathogenic | -1.484 | Destabilizing | 0.037 | N | 0.399 | neutral | None | None | None | None | I |
S/I | 0.5076 | ambiguous | 0.4491 | ambiguous | -0.477 | Destabilizing | 0.028 | N | 0.391 | neutral | N | 0.496509792 | None | None | I |
S/K | 0.9304 | likely_pathogenic | 0.9072 | pathogenic | -0.548 | Destabilizing | 0.842 | D | 0.386 | neutral | None | None | None | None | I |
S/L | 0.3091 | likely_benign | 0.2706 | benign | -0.477 | Destabilizing | 0.728 | D | 0.496 | neutral | None | None | None | None | I |
S/M | 0.4803 | ambiguous | 0.4453 | ambiguous | -0.091 | Destabilizing | 0.949 | D | 0.495 | neutral | None | None | None | None | I |
S/N | 0.39 | ambiguous | 0.3665 | ambiguous | -0.397 | Destabilizing | 0.801 | D | 0.43 | neutral | D | 0.534465053 | None | None | I |
S/P | 0.9011 | likely_pathogenic | 0.8704 | pathogenic | -0.566 | Destabilizing | 0.974 | D | 0.489 | neutral | None | None | None | None | I |
S/Q | 0.8185 | likely_pathogenic | 0.775 | pathogenic | -0.644 | Destabilizing | 0.974 | D | 0.418 | neutral | None | None | None | None | I |
S/R | 0.865 | likely_pathogenic | 0.8193 | pathogenic | -0.394 | Destabilizing | 0.934 | D | 0.481 | neutral | N | 0.495946738 | None | None | I |
S/T | 0.1512 | likely_benign | 0.1603 | benign | -0.548 | Destabilizing | 0.051 | N | 0.301 | neutral | N | 0.497754892 | None | None | I |
S/V | 0.5203 | ambiguous | 0.482 | ambiguous | -0.566 | Destabilizing | 0.728 | D | 0.489 | neutral | None | None | None | None | I |
S/W | 0.8432 | likely_pathogenic | 0.7789 | pathogenic | -1.14 | Destabilizing | 0.998 | D | 0.683 | prob.neutral | None | None | None | None | I |
S/Y | 0.6148 | likely_pathogenic | 0.5416 | ambiguous | -0.896 | Destabilizing | 0.949 | D | 0.579 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.