Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 35773 | 107542;107543;107544 | chr2:178528334;178528333;178528332 | chr2:179393061;179393060;179393059 |
N2AB | 34132 | 102619;102620;102621 | chr2:178528334;178528333;178528332 | chr2:179393061;179393060;179393059 |
N2A | 33205 | 99838;99839;99840 | chr2:178528334;178528333;178528332 | chr2:179393061;179393060;179393059 |
N2B | 26708 | 80347;80348;80349 | chr2:178528334;178528333;178528332 | chr2:179393061;179393060;179393059 |
Novex-1 | 26833 | 80722;80723;80724 | chr2:178528334;178528333;178528332 | chr2:179393061;179393060;179393059 |
Novex-2 | 26900 | 80923;80924;80925 | chr2:178528334;178528333;178528332 | chr2:179393061;179393060;179393059 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/K | None | None | 1.0 | N | 0.819 | 0.371 | None | gnomAD-4.0.0 | 3.1821E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71562E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1845 | likely_benign | 0.1801 | benign | -1.485 | Destabilizing | 0.999 | D | 0.555 | neutral | N | 0.469876484 | None | None | N |
T/C | 0.7471 | likely_pathogenic | 0.7876 | pathogenic | -0.985 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
T/D | 0.806 | likely_pathogenic | 0.8112 | pathogenic | -1.717 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
T/E | 0.6233 | likely_pathogenic | 0.6153 | pathogenic | -1.459 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
T/F | 0.5206 | ambiguous | 0.5323 | ambiguous | -1.105 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
T/G | 0.6234 | likely_pathogenic | 0.624 | pathogenic | -1.91 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | N |
T/H | 0.5281 | ambiguous | 0.5257 | ambiguous | -1.81 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
T/I | 0.3165 | likely_benign | 0.317 | benign | -0.337 | Destabilizing | 1.0 | D | 0.82 | deleterious | N | 0.506466723 | None | None | N |
T/K | 0.5422 | ambiguous | 0.5288 | ambiguous | -0.281 | Destabilizing | 1.0 | D | 0.819 | deleterious | N | 0.511680542 | None | None | N |
T/L | 0.2518 | likely_benign | 0.2472 | benign | -0.337 | Destabilizing | 0.999 | D | 0.667 | neutral | None | None | None | None | N |
T/M | 0.141 | likely_benign | 0.1431 | benign | -0.512 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
T/N | 0.3418 | ambiguous | 0.339 | benign | -1.112 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
T/P | 0.9066 | likely_pathogenic | 0.9049 | pathogenic | -0.693 | Destabilizing | 1.0 | D | 0.825 | deleterious | N | 0.514594144 | None | None | N |
T/Q | 0.4452 | ambiguous | 0.4351 | ambiguous | -0.809 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
T/R | 0.4082 | ambiguous | 0.3945 | ambiguous | -0.621 | Destabilizing | 1.0 | D | 0.835 | deleterious | N | 0.508736237 | None | None | N |
T/S | 0.2232 | likely_benign | 0.2196 | benign | -1.382 | Destabilizing | 0.999 | D | 0.521 | neutral | N | 0.446244983 | None | None | N |
T/V | 0.2487 | likely_benign | 0.2489 | benign | -0.693 | Destabilizing | 0.999 | D | 0.567 | neutral | None | None | None | None | N |
T/W | 0.8563 | likely_pathogenic | 0.8628 | pathogenic | -1.223 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
T/Y | 0.6093 | likely_pathogenic | 0.6144 | pathogenic | -0.841 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.