Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3832 | 11719;11720;11721 | chr2:178741739;178741738;178741737 | chr2:179606466;179606465;179606464 |
N2AB | 3515 | 10768;10769;10770 | chr2:178741739;178741738;178741737 | chr2:179606466;179606465;179606464 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3469 | 10630;10631;10632 | chr2:178741739;178741738;178741737 | chr2:179606466;179606465;179606464 |
Novex-1 | 3594 | 11005;11006;11007 | chr2:178741739;178741738;178741737 | chr2:179606466;179606465;179606464 |
Novex-2 | 3661 | 11206;11207;11208 | chr2:178741739;178741738;178741737 | chr2:179606466;179606465;179606464 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/I | None | None | 0.001 | N | 0.247 | 0.131 | None | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0893 | likely_benign | 0.0945 | benign | -0.504 | Destabilizing | 0.036 | N | 0.236 | neutral | None | None | None | None | N |
S/C | 0.1021 | likely_benign | 0.1002 | benign | -0.259 | Destabilizing | 0.001 | N | 0.303 | neutral | N | 0.516659286 | None | None | N |
S/D | 0.2193 | likely_benign | 0.2389 | benign | -0.054 | Destabilizing | 0.08 | N | 0.249 | neutral | None | None | None | None | N |
S/E | 0.3403 | ambiguous | 0.3763 | ambiguous | -0.138 | Destabilizing | 0.148 | N | 0.249 | neutral | None | None | None | None | N |
S/F | 0.1884 | likely_benign | 0.1791 | benign | -1.039 | Destabilizing | 0.001 | N | 0.259 | neutral | None | None | None | None | N |
S/G | 0.0924 | likely_benign | 0.09 | benign | -0.641 | Destabilizing | 0.061 | N | 0.263 | neutral | N | 0.493146758 | None | None | N |
S/H | 0.2149 | likely_benign | 0.2283 | benign | -1.203 | Destabilizing | 0.596 | D | 0.391 | neutral | None | None | None | None | N |
S/I | 0.1177 | likely_benign | 0.12 | benign | -0.268 | Destabilizing | 0.001 | N | 0.247 | neutral | N | 0.473980609 | None | None | N |
S/K | 0.3947 | ambiguous | 0.4245 | ambiguous | -0.536 | Destabilizing | 0.08 | N | 0.265 | neutral | None | None | None | None | N |
S/L | 0.1008 | likely_benign | 0.1004 | benign | -0.268 | Destabilizing | 0.013 | N | 0.348 | neutral | None | None | None | None | N |
S/M | 0.2069 | likely_benign | 0.2059 | benign | 0.149 | Stabilizing | 0.016 | N | 0.295 | neutral | None | None | None | None | N |
S/N | 0.0974 | likely_benign | 0.0948 | benign | -0.277 | Destabilizing | None | N | 0.155 | neutral | N | 0.485299976 | None | None | N |
S/P | 0.1879 | likely_benign | 0.1872 | benign | -0.317 | Destabilizing | 0.46 | N | 0.445 | neutral | None | None | None | None | N |
S/Q | 0.3287 | likely_benign | 0.3607 | ambiguous | -0.574 | Destabilizing | 0.296 | N | 0.271 | neutral | None | None | None | None | N |
S/R | 0.2664 | likely_benign | 0.2883 | benign | -0.307 | Destabilizing | None | N | 0.197 | neutral | N | 0.444161385 | None | None | N |
S/T | 0.0832 | likely_benign | 0.084 | benign | -0.38 | Destabilizing | 0.002 | N | 0.156 | neutral | N | 0.440276363 | None | None | N |
S/V | 0.1568 | likely_benign | 0.1616 | benign | -0.317 | Destabilizing | 0.013 | N | 0.422 | neutral | None | None | None | None | N |
S/W | 0.3258 | likely_benign | 0.3127 | benign | -1.007 | Destabilizing | 0.001 | N | 0.385 | neutral | None | None | None | None | N |
S/Y | 0.1679 | likely_benign | 0.1582 | benign | -0.743 | Destabilizing | 0.174 | N | 0.488 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.