Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3841 | 11746;11747;11748 | chr2:178741712;178741711;178741710 | chr2:179606439;179606438;179606437 |
N2AB | 3524 | 10795;10796;10797 | chr2:178741712;178741711;178741710 | chr2:179606439;179606438;179606437 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3478 | 10657;10658;10659 | chr2:178741712;178741711;178741710 | chr2:179606439;179606438;179606437 |
Novex-1 | 3603 | 11032;11033;11034 | chr2:178741712;178741711;178741710 | chr2:179606439;179606438;179606437 |
Novex-2 | 3670 | 11233;11234;11235 | chr2:178741712;178741711;178741710 | chr2:179606439;179606438;179606437 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs755132807 | -0.178 | 0.997 | N | 0.588 | 0.339 | None | gnomAD-2.1.1 | 2.14E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 3.91E-05 | 0 |
V/I | rs755132807 | -0.178 | 0.997 | N | 0.588 | 0.339 | None | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
V/I | rs755132807 | -0.178 | 0.997 | N | 0.588 | 0.339 | None | gnomAD-4.0.0 | 2.35496E-05 | None | None | None | None | N | None | 1.33501E-05 | 0 | None | 0 | 0 | None | 0 | 1.64366E-04 | 2.20387E-05 | 8.78291E-05 | 3.20266E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.476 | ambiguous | 0.4066 | ambiguous | -2.238 | Highly Destabilizing | 0.999 | D | 0.715 | prob.delet. | N | 0.451946431 | None | None | N |
V/C | 0.9038 | likely_pathogenic | 0.8935 | pathogenic | -2.048 | Highly Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
V/D | 0.9823 | likely_pathogenic | 0.9794 | pathogenic | -3.243 | Highly Destabilizing | 1.0 | D | 0.914 | deleterious | None | None | None | None | N |
V/E | 0.9612 | likely_pathogenic | 0.9589 | pathogenic | -2.981 | Highly Destabilizing | 1.0 | D | 0.914 | deleterious | D | 0.574409822 | None | None | N |
V/F | 0.7405 | likely_pathogenic | 0.6879 | pathogenic | -1.216 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | N |
V/G | 0.7252 | likely_pathogenic | 0.674 | pathogenic | -2.81 | Highly Destabilizing | 1.0 | D | 0.908 | deleterious | N | 0.449765476 | None | None | N |
V/H | 0.9914 | likely_pathogenic | 0.9899 | pathogenic | -2.652 | Highly Destabilizing | 1.0 | D | 0.935 | deleterious | None | None | None | None | N |
V/I | 0.1339 | likely_benign | 0.1231 | benign | -0.605 | Destabilizing | 0.997 | D | 0.588 | neutral | N | 0.443448408 | None | None | N |
V/K | 0.9734 | likely_pathogenic | 0.9745 | pathogenic | -1.836 | Destabilizing | 1.0 | D | 0.915 | deleterious | None | None | None | None | N |
V/L | 0.6351 | likely_pathogenic | 0.5818 | pathogenic | -0.605 | Destabilizing | 0.997 | D | 0.707 | prob.neutral | N | 0.442190736 | None | None | N |
V/M | 0.4831 | ambiguous | 0.4142 | ambiguous | -0.908 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
V/N | 0.9505 | likely_pathogenic | 0.936 | pathogenic | -2.346 | Highly Destabilizing | 1.0 | D | 0.939 | deleterious | None | None | None | None | N |
V/P | 0.9912 | likely_pathogenic | 0.9894 | pathogenic | -1.127 | Destabilizing | 1.0 | D | 0.909 | deleterious | None | None | None | None | N |
V/Q | 0.9648 | likely_pathogenic | 0.9622 | pathogenic | -2.1 | Highly Destabilizing | 1.0 | D | 0.943 | deleterious | None | None | None | None | N |
V/R | 0.9583 | likely_pathogenic | 0.9631 | pathogenic | -1.778 | Destabilizing | 1.0 | D | 0.944 | deleterious | None | None | None | None | N |
V/S | 0.7714 | likely_pathogenic | 0.7092 | pathogenic | -2.912 | Highly Destabilizing | 1.0 | D | 0.908 | deleterious | None | None | None | None | N |
V/T | 0.5986 | likely_pathogenic | 0.5277 | ambiguous | -2.503 | Highly Destabilizing | 0.999 | D | 0.745 | deleterious | None | None | None | None | N |
V/W | 0.997 | likely_pathogenic | 0.9961 | pathogenic | -1.829 | Destabilizing | 1.0 | D | 0.939 | deleterious | None | None | None | None | N |
V/Y | 0.9779 | likely_pathogenic | 0.9752 | pathogenic | -1.493 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.