Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3849 | 11770;11771;11772 | chr2:178741688;178741687;178741686 | chr2:179606415;179606414;179606413 |
N2AB | 3532 | 10819;10820;10821 | chr2:178741688;178741687;178741686 | chr2:179606415;179606414;179606413 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3486 | 10681;10682;10683 | chr2:178741688;178741687;178741686 | chr2:179606415;179606414;179606413 |
Novex-1 | 3611 | 11056;11057;11058 | chr2:178741688;178741687;178741686 | chr2:179606415;179606414;179606413 |
Novex-2 | 3678 | 11257;11258;11259 | chr2:178741688;178741687;178741686 | chr2:179606415;179606414;179606413 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs727503662 | None | 1.0 | D | 0.887 | 0.607 | None | gnomAD-4.0.0 | 2.05263E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69844E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.4743 | ambiguous | 0.4762 | ambiguous | -1.842 | Destabilizing | 1.0 | D | 0.807 | deleterious | D | 0.627874288 | None | None | N |
P/C | 0.9463 | likely_pathogenic | 0.9546 | pathogenic | -1.254 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
P/D | 0.9835 | likely_pathogenic | 0.9871 | pathogenic | -2.441 | Highly Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
P/E | 0.9402 | likely_pathogenic | 0.9468 | pathogenic | -2.394 | Highly Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
P/F | 0.9858 | likely_pathogenic | 0.9853 | pathogenic | -1.378 | Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
P/G | 0.9064 | likely_pathogenic | 0.9173 | pathogenic | -2.215 | Highly Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
P/H | 0.9409 | likely_pathogenic | 0.9494 | pathogenic | -1.93 | Destabilizing | 1.0 | D | 0.873 | deleterious | D | 0.806622685 | None | None | N |
P/I | 0.8889 | likely_pathogenic | 0.898 | pathogenic | -0.871 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
P/K | 0.9657 | likely_pathogenic | 0.9742 | pathogenic | -1.538 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
P/L | 0.7018 | likely_pathogenic | 0.7139 | pathogenic | -0.871 | Destabilizing | 1.0 | D | 0.887 | deleterious | D | 0.690035916 | None | None | N |
P/M | 0.9218 | likely_pathogenic | 0.921 | pathogenic | -0.62 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
P/N | 0.9661 | likely_pathogenic | 0.9711 | pathogenic | -1.454 | Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
P/Q | 0.8844 | likely_pathogenic | 0.8971 | pathogenic | -1.58 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
P/R | 0.9219 | likely_pathogenic | 0.942 | pathogenic | -1.086 | Destabilizing | 1.0 | D | 0.903 | deleterious | D | 0.805813502 | None | None | N |
P/S | 0.8177 | likely_pathogenic | 0.8323 | pathogenic | -1.91 | Destabilizing | 1.0 | D | 0.859 | deleterious | D | 0.690031634 | None | None | N |
P/T | 0.7301 | likely_pathogenic | 0.7697 | pathogenic | -1.761 | Destabilizing | 1.0 | D | 0.871 | deleterious | D | 0.665863911 | None | None | N |
P/V | 0.7866 | likely_pathogenic | 0.8027 | pathogenic | -1.164 | Destabilizing | 1.0 | D | 0.896 | deleterious | None | None | None | None | N |
P/W | 0.9929 | likely_pathogenic | 0.994 | pathogenic | -1.737 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
P/Y | 0.9797 | likely_pathogenic | 0.9824 | pathogenic | -1.444 | Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.