Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3850 | 11773;11774;11775 | chr2:178741685;178741684;178741683 | chr2:179606412;179606411;179606410 |
N2AB | 3533 | 10822;10823;10824 | chr2:178741685;178741684;178741683 | chr2:179606412;179606411;179606410 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3487 | 10684;10685;10686 | chr2:178741685;178741684;178741683 | chr2:179606412;179606411;179606410 |
Novex-1 | 3612 | 11059;11060;11061 | chr2:178741685;178741684;178741683 | chr2:179606412;179606411;179606410 |
Novex-2 | 3679 | 11260;11261;11262 | chr2:178741685;178741684;178741683 | chr2:179606412;179606411;179606410 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.012 | N | 0.442 | 0.075 | None | gnomAD-4.0.0 | 1.59128E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8584E-06 | 0 | 0 |
K/R | rs763263943 | 0.004 | None | N | 0.25 | 0.08 | None | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
K/R | rs763263943 | 0.004 | None | N | 0.25 | 0.08 | None | gnomAD-4.0.0 | 1.59128E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43275E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2707 | likely_benign | 0.2848 | benign | -0.062 | Destabilizing | 0.016 | N | 0.325 | neutral | None | None | None | None | I |
K/C | 0.6809 | likely_pathogenic | 0.7212 | pathogenic | -0.211 | Destabilizing | 0.864 | D | 0.423 | neutral | None | None | None | None | I |
K/D | 0.4166 | ambiguous | 0.4171 | ambiguous | 0.106 | Stabilizing | 0.072 | N | 0.495 | neutral | None | None | None | None | I |
K/E | 0.1008 | likely_benign | 0.0976 | benign | 0.135 | Stabilizing | 0.012 | N | 0.442 | neutral | N | 0.456904444 | None | None | I |
K/F | 0.7136 | likely_pathogenic | 0.7061 | pathogenic | -0.127 | Destabilizing | 0.214 | N | 0.453 | neutral | None | None | None | None | I |
K/G | 0.4112 | ambiguous | 0.4323 | ambiguous | -0.306 | Destabilizing | 0.072 | N | 0.485 | neutral | None | None | None | None | I |
K/H | 0.2959 | likely_benign | 0.3101 | benign | -0.609 | Destabilizing | 0.214 | N | 0.487 | neutral | None | None | None | None | I |
K/I | 0.2614 | likely_benign | 0.2489 | benign | 0.513 | Stabilizing | 0.001 | N | 0.297 | neutral | N | 0.508425192 | None | None | I |
K/L | 0.3145 | likely_benign | 0.3215 | benign | 0.513 | Stabilizing | 0.016 | N | 0.331 | neutral | None | None | None | None | I |
K/M | 0.1953 | likely_benign | 0.191 | benign | 0.257 | Stabilizing | 0.356 | N | 0.489 | neutral | None | None | None | None | I |
K/N | 0.2615 | likely_benign | 0.258 | benign | 0.149 | Stabilizing | 0.055 | N | 0.45 | neutral | N | 0.501537122 | None | None | I |
K/P | 0.7803 | likely_pathogenic | 0.8388 | pathogenic | 0.351 | Stabilizing | 0.136 | N | 0.562 | neutral | None | None | None | None | I |
K/Q | 0.1077 | likely_benign | 0.113 | benign | 0.006 | Stabilizing | None | N | 0.164 | neutral | N | 0.496674728 | None | None | I |
K/R | 0.0834 | likely_benign | 0.0867 | benign | -0.154 | Destabilizing | None | N | 0.25 | neutral | N | 0.503373505 | None | None | I |
K/S | 0.304 | likely_benign | 0.2988 | benign | -0.364 | Destabilizing | 0.016 | N | 0.423 | neutral | None | None | None | None | I |
K/T | 0.1411 | likely_benign | 0.1388 | benign | -0.171 | Destabilizing | None | N | 0.199 | neutral | N | 0.47886906 | None | None | I |
K/V | 0.2537 | likely_benign | 0.2485 | benign | 0.351 | Stabilizing | 0.001 | N | 0.269 | neutral | None | None | None | None | I |
K/W | 0.7534 | likely_pathogenic | 0.7719 | pathogenic | -0.114 | Destabilizing | 0.864 | D | 0.434 | neutral | None | None | None | None | I |
K/Y | 0.5648 | likely_pathogenic | 0.5711 | pathogenic | 0.218 | Stabilizing | 0.356 | N | 0.474 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.