Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3851 | 11776;11777;11778 | chr2:178741682;178741681;178741680 | chr2:179606409;179606408;179606407 |
N2AB | 3534 | 10825;10826;10827 | chr2:178741682;178741681;178741680 | chr2:179606409;179606408;179606407 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3488 | 10687;10688;10689 | chr2:178741682;178741681;178741680 | chr2:179606409;179606408;179606407 |
Novex-1 | 3613 | 11062;11063;11064 | chr2:178741682;178741681;178741680 | chr2:179606409;179606408;179606407 |
Novex-2 | 3680 | 11263;11264;11265 | chr2:178741682;178741681;178741680 | chr2:179606409;179606408;179606407 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.338 | D | 0.733 | 0.535 | None | gnomAD-4.0.0 | 5.47367E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59793E-06 | 4.63736E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8311 | likely_pathogenic | 0.8247 | pathogenic | -2.161 | Highly Destabilizing | 0.218 | N | 0.717 | prob.delet. | None | None | None | None | I |
I/C | 0.876 | likely_pathogenic | 0.8856 | pathogenic | -1.096 | Destabilizing | 0.973 | D | 0.774 | deleterious | None | None | None | None | I |
I/D | 0.9728 | likely_pathogenic | 0.9806 | pathogenic | -2.007 | Highly Destabilizing | 0.906 | D | 0.86 | deleterious | None | None | None | None | I |
I/E | 0.9292 | likely_pathogenic | 0.9433 | pathogenic | -1.929 | Destabilizing | 0.906 | D | 0.835 | deleterious | None | None | None | None | I |
I/F | 0.3462 | ambiguous | 0.3462 | ambiguous | -1.447 | Destabilizing | 0.782 | D | 0.708 | prob.delet. | D | 0.619698062 | None | None | I |
I/G | 0.9408 | likely_pathogenic | 0.9449 | pathogenic | -2.556 | Highly Destabilizing | 0.906 | D | 0.813 | deleterious | None | None | None | None | I |
I/H | 0.9057 | likely_pathogenic | 0.9245 | pathogenic | -1.798 | Destabilizing | 0.991 | D | 0.853 | deleterious | None | None | None | None | I |
I/K | 0.8241 | likely_pathogenic | 0.8648 | pathogenic | -1.584 | Destabilizing | 0.906 | D | 0.841 | deleterious | None | None | None | None | I |
I/L | 0.2149 | likely_benign | 0.2197 | benign | -1.086 | Destabilizing | 0.084 | N | 0.419 | neutral | D | 0.577958716 | None | None | I |
I/M | 0.1984 | likely_benign | 0.2006 | benign | -0.747 | Destabilizing | 0.782 | D | 0.691 | prob.neutral | D | 0.654502453 | None | None | I |
I/N | 0.7314 | likely_pathogenic | 0.774 | pathogenic | -1.446 | Destabilizing | 0.957 | D | 0.864 | deleterious | D | 0.731375063 | None | None | I |
I/P | 0.9213 | likely_pathogenic | 0.9345 | pathogenic | -1.42 | Destabilizing | 0.967 | D | 0.863 | deleterious | None | None | None | None | I |
I/Q | 0.8687 | likely_pathogenic | 0.8974 | pathogenic | -1.552 | Destabilizing | 0.967 | D | 0.857 | deleterious | None | None | None | None | I |
I/R | 0.7794 | likely_pathogenic | 0.832 | pathogenic | -1.024 | Destabilizing | 0.906 | D | 0.864 | deleterious | None | None | None | None | I |
I/S | 0.772 | likely_pathogenic | 0.7939 | pathogenic | -2.024 | Highly Destabilizing | 0.782 | D | 0.822 | deleterious | D | 0.767328348 | None | None | I |
I/T | 0.6704 | likely_pathogenic | 0.6881 | pathogenic | -1.827 | Destabilizing | 0.338 | N | 0.733 | prob.delet. | D | 0.647396739 | None | None | I |
I/V | 0.1365 | likely_benign | 0.1225 | benign | -1.42 | Destabilizing | None | N | 0.235 | neutral | N | 0.470406626 | None | None | I |
I/W | 0.9369 | likely_pathogenic | 0.9493 | pathogenic | -1.624 | Destabilizing | 0.991 | D | 0.859 | deleterious | None | None | None | None | I |
I/Y | 0.7685 | likely_pathogenic | 0.8032 | pathogenic | -1.413 | Destabilizing | 0.906 | D | 0.783 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.