Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3857 | 11794;11795;11796 | chr2:178741664;178741663;178741662 | chr2:179606391;179606390;179606389 |
N2AB | 3540 | 10843;10844;10845 | chr2:178741664;178741663;178741662 | chr2:179606391;179606390;179606389 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3494 | 10705;10706;10707 | chr2:178741664;178741663;178741662 | chr2:179606391;179606390;179606389 |
Novex-1 | 3619 | 11080;11081;11082 | chr2:178741664;178741663;178741662 | chr2:179606391;179606390;179606389 |
Novex-2 | 3686 | 11281;11282;11283 | chr2:178741664;178741663;178741662 | chr2:179606391;179606390;179606389 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | rs777025488 | -0.353 | 0.982 | D | 0.583 | 0.439 | None | gnomAD-4.0.0 | 1.27299E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.12952E-04 | 0 | 5.71651E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.3789 | ambiguous | 0.3568 | ambiguous | -0.354 | Destabilizing | 0.885 | D | 0.378 | neutral | D | 0.562608104 | None | None | I |
G/C | 0.5253 | ambiguous | 0.4815 | ambiguous | -0.906 | Destabilizing | 0.999 | D | 0.68 | prob.neutral | None | None | None | None | I |
G/D | 0.1704 | likely_benign | 0.1879 | benign | -0.386 | Destabilizing | 0.91 | D | 0.501 | neutral | None | None | None | None | I |
G/E | 0.2799 | likely_benign | 0.2745 | benign | -0.518 | Destabilizing | 0.1 | N | 0.329 | neutral | N | 0.467559123 | None | None | I |
G/F | 0.9154 | likely_pathogenic | 0.9065 | pathogenic | -0.896 | Destabilizing | 0.999 | D | 0.671 | neutral | None | None | None | None | I |
G/H | 0.4853 | ambiguous | 0.4861 | ambiguous | -0.524 | Destabilizing | 0.998 | D | 0.585 | neutral | None | None | None | None | I |
G/I | 0.8532 | likely_pathogenic | 0.8213 | pathogenic | -0.383 | Destabilizing | 0.993 | D | 0.684 | prob.neutral | None | None | None | None | I |
G/K | 0.4587 | ambiguous | 0.4363 | ambiguous | -0.853 | Destabilizing | 0.973 | D | 0.533 | neutral | None | None | None | None | I |
G/L | 0.874 | likely_pathogenic | 0.8568 | pathogenic | -0.383 | Destabilizing | 0.986 | D | 0.671 | neutral | None | None | None | None | I |
G/M | 0.8569 | likely_pathogenic | 0.8295 | pathogenic | -0.538 | Destabilizing | 0.999 | D | 0.667 | neutral | None | None | None | None | I |
G/N | 0.2746 | likely_benign | 0.2977 | benign | -0.573 | Destabilizing | 0.128 | N | 0.318 | neutral | None | None | None | None | I |
G/P | 0.9902 | likely_pathogenic | 0.99 | pathogenic | -0.338 | Destabilizing | 0.993 | D | 0.581 | neutral | None | None | None | None | I |
G/Q | 0.4132 | ambiguous | 0.4116 | ambiguous | -0.793 | Destabilizing | 0.986 | D | 0.579 | neutral | None | None | None | None | I |
G/R | 0.321 | likely_benign | 0.2941 | benign | -0.435 | Destabilizing | 0.982 | D | 0.583 | neutral | D | 0.599530278 | None | None | I |
G/S | 0.1353 | likely_benign | 0.1405 | benign | -0.774 | Destabilizing | 0.386 | N | 0.283 | neutral | None | None | None | None | I |
G/T | 0.4722 | ambiguous | 0.4621 | ambiguous | -0.823 | Destabilizing | 0.973 | D | 0.533 | neutral | None | None | None | None | I |
G/V | 0.7531 | likely_pathogenic | 0.7175 | pathogenic | -0.338 | Destabilizing | 0.982 | D | 0.665 | neutral | D | 0.717100599 | None | None | I |
G/W | 0.786 | likely_pathogenic | 0.7651 | pathogenic | -1.083 | Destabilizing | 0.999 | D | 0.617 | neutral | None | None | None | None | I |
G/Y | 0.742 | likely_pathogenic | 0.7319 | pathogenic | -0.727 | Destabilizing | 0.999 | D | 0.673 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.