Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3863 | 11812;11813;11814 | chr2:178741646;178741645;178741644 | chr2:179606373;179606372;179606371 |
N2AB | 3546 | 10861;10862;10863 | chr2:178741646;178741645;178741644 | chr2:179606373;179606372;179606371 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3500 | 10723;10724;10725 | chr2:178741646;178741645;178741644 | chr2:179606373;179606372;179606371 |
Novex-1 | 3625 | 11098;11099;11100 | chr2:178741646;178741645;178741644 | chr2:179606373;179606372;179606371 |
Novex-2 | 3692 | 11299;11300;11301 | chr2:178741646;178741645;178741644 | chr2:179606373;179606372;179606371 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | None | None | 0.997 | D | 0.595 | 0.414 | None | gnomAD-4.0.0 | 6.84196E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9946E-07 | 0 | 0 |
S/Y | None | None | 0.997 | D | 0.581 | 0.414 | None | gnomAD-4.0.0 | 6.84196E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15931E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1217 | likely_benign | 0.1198 | benign | -0.309 | Destabilizing | 0.76 | D | 0.346 | neutral | N | 0.442927287 | None | None | I |
S/C | 0.1728 | likely_benign | 0.1631 | benign | -0.278 | Destabilizing | 0.1 | N | 0.359 | neutral | D | 0.606993599 | None | None | I |
S/D | 0.6348 | likely_pathogenic | 0.5776 | pathogenic | 0.538 | Stabilizing | 0.998 | D | 0.443 | neutral | None | None | None | None | I |
S/E | 0.8231 | likely_pathogenic | 0.7854 | pathogenic | 0.47 | Stabilizing | 0.998 | D | 0.453 | neutral | None | None | None | None | I |
S/F | 0.4666 | ambiguous | 0.3821 | ambiguous | -0.857 | Destabilizing | 0.997 | D | 0.595 | neutral | D | 0.605738348 | None | None | I |
S/G | 0.1538 | likely_benign | 0.135 | benign | -0.441 | Destabilizing | 0.976 | D | 0.379 | neutral | None | None | None | None | I |
S/H | 0.6487 | likely_pathogenic | 0.6025 | pathogenic | -0.832 | Destabilizing | 0.999 | D | 0.487 | neutral | None | None | None | None | I |
S/I | 0.5308 | ambiguous | 0.4623 | ambiguous | -0.09 | Destabilizing | 0.986 | D | 0.6 | neutral | None | None | None | None | I |
S/K | 0.9116 | likely_pathogenic | 0.8813 | pathogenic | -0.3 | Destabilizing | 0.998 | D | 0.424 | neutral | None | None | None | None | I |
S/L | 0.2004 | likely_benign | 0.166 | benign | -0.09 | Destabilizing | 0.91 | D | 0.512 | neutral | None | None | None | None | I |
S/M | 0.4082 | ambiguous | 0.3811 | ambiguous | -0.077 | Destabilizing | 0.999 | D | 0.476 | neutral | None | None | None | None | I |
S/N | 0.3124 | likely_benign | 0.2922 | benign | -0.104 | Destabilizing | 0.998 | D | 0.481 | neutral | None | None | None | None | I |
S/P | 0.8896 | likely_pathogenic | 0.8101 | pathogenic | -0.133 | Destabilizing | 0.997 | D | 0.477 | neutral | N | 0.517809986 | None | None | I |
S/Q | 0.8227 | likely_pathogenic | 0.7976 | pathogenic | -0.249 | Destabilizing | 0.998 | D | 0.426 | neutral | None | None | None | None | I |
S/R | 0.8525 | likely_pathogenic | 0.8003 | pathogenic | -0.167 | Destabilizing | 0.998 | D | 0.471 | neutral | None | None | None | None | I |
S/T | 0.1287 | likely_benign | 0.1203 | benign | -0.208 | Destabilizing | 0.939 | D | 0.405 | neutral | N | 0.461139953 | None | None | I |
S/V | 0.4512 | ambiguous | 0.3955 | ambiguous | -0.133 | Destabilizing | 0.986 | D | 0.544 | neutral | None | None | None | None | I |
S/W | 0.7455 | likely_pathogenic | 0.6619 | pathogenic | -0.903 | Destabilizing | 0.999 | D | 0.679 | prob.neutral | None | None | None | None | I |
S/Y | 0.447 | ambiguous | 0.3581 | ambiguous | -0.59 | Destabilizing | 0.997 | D | 0.581 | neutral | D | 0.565764985 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.