Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3867 | 11824;11825;11826 | chr2:178741634;178741633;178741632 | chr2:179606361;179606360;179606359 |
N2AB | 3550 | 10873;10874;10875 | chr2:178741634;178741633;178741632 | chr2:179606361;179606360;179606359 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3504 | 10735;10736;10737 | chr2:178741634;178741633;178741632 | chr2:179606361;179606360;179606359 |
Novex-1 | 3629 | 11110;11111;11112 | chr2:178741634;178741633;178741632 | chr2:179606361;179606360;179606359 |
Novex-2 | 3696 | 11311;11312;11313 | chr2:178741634;178741633;178741632 | chr2:179606361;179606360;179606359 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs769510047 | -0.191 | 0.071 | N | 0.162 | 0.137 | None | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
K/R | rs769510047 | -0.191 | 0.071 | N | 0.162 | 0.137 | None | gnomAD-4.0.0 | 3.18239E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71628E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.76 | likely_pathogenic | 0.7706 | pathogenic | -0.851 | Destabilizing | 0.942 | D | 0.447 | neutral | None | None | None | None | N |
K/C | 0.8686 | likely_pathogenic | 0.8885 | pathogenic | -0.826 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
K/D | 0.9132 | likely_pathogenic | 0.9091 | pathogenic | -0.056 | Destabilizing | 0.996 | D | 0.531 | neutral | None | None | None | None | N |
K/E | 0.4442 | ambiguous | 0.5106 | ambiguous | 0.142 | Stabilizing | 0.961 | D | 0.413 | neutral | N | 0.499830769 | None | None | N |
K/F | 0.9519 | likely_pathogenic | 0.9541 | pathogenic | -0.297 | Destabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | N |
K/G | 0.8791 | likely_pathogenic | 0.8734 | pathogenic | -1.28 | Destabilizing | 0.97 | D | 0.489 | neutral | None | None | None | None | N |
K/H | 0.5388 | ambiguous | 0.5683 | pathogenic | -1.338 | Destabilizing | 1.0 | D | 0.619 | neutral | None | None | None | None | N |
K/I | 0.6511 | likely_pathogenic | 0.6627 | pathogenic | 0.303 | Stabilizing | 0.989 | D | 0.666 | neutral | N | 0.517220834 | None | None | N |
K/L | 0.6627 | likely_pathogenic | 0.668 | pathogenic | 0.303 | Stabilizing | 0.97 | D | 0.501 | neutral | None | None | None | None | N |
K/M | 0.5245 | ambiguous | 0.5389 | ambiguous | 0.009 | Stabilizing | 1.0 | D | 0.616 | neutral | None | None | None | None | N |
K/N | 0.7968 | likely_pathogenic | 0.7954 | pathogenic | -0.706 | Destabilizing | 0.989 | D | 0.469 | neutral | N | 0.505371329 | None | None | N |
K/P | 0.9848 | likely_pathogenic | 0.9777 | pathogenic | -0.054 | Destabilizing | 0.996 | D | 0.595 | neutral | None | None | None | None | N |
K/Q | 0.2875 | likely_benign | 0.3428 | ambiguous | -0.58 | Destabilizing | 0.989 | D | 0.497 | neutral | N | 0.469678898 | None | None | N |
K/R | 0.1218 | likely_benign | 0.1307 | benign | -0.527 | Destabilizing | 0.071 | N | 0.162 | neutral | N | 0.474247147 | None | None | N |
K/S | 0.7732 | likely_pathogenic | 0.7792 | pathogenic | -1.454 | Destabilizing | 0.942 | D | 0.392 | neutral | None | None | None | None | N |
K/T | 0.4101 | ambiguous | 0.4061 | ambiguous | -1.01 | Destabilizing | 0.433 | N | 0.256 | neutral | N | 0.443499596 | None | None | N |
K/V | 0.6507 | likely_pathogenic | 0.6511 | pathogenic | -0.054 | Destabilizing | 0.983 | D | 0.513 | neutral | None | None | None | None | N |
K/W | 0.9511 | likely_pathogenic | 0.9513 | pathogenic | -0.165 | Destabilizing | 1.0 | D | 0.672 | neutral | None | None | None | None | N |
K/Y | 0.8442 | likely_pathogenic | 0.8551 | pathogenic | 0.126 | Stabilizing | 0.999 | D | 0.652 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.