Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3878 | 11857;11858;11859 | chr2:178741601;178741600;178741599 | chr2:179606328;179606327;179606326 |
N2AB | 3561 | 10906;10907;10908 | chr2:178741601;178741600;178741599 | chr2:179606328;179606327;179606326 |
N2A | None | None | chr2:None | chr2:None |
N2B | 3515 | 10768;10769;10770 | chr2:178741601;178741600;178741599 | chr2:179606328;179606327;179606326 |
Novex-1 | 3640 | 11143;11144;11145 | chr2:178741601;178741600;178741599 | chr2:179606328;179606327;179606326 |
Novex-2 | 3707 | 11344;11345;11346 | chr2:178741601;178741600;178741599 | chr2:179606328;179606327;179606326 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/N | None | None | 0.996 | N | 0.663 | 0.403 | None | gnomAD-4.0.0 | 6.84195E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.7337E-04 | 0 | 0 | 0 |
I/T | None | None | 0.92 | N | 0.539 | 0.257 | None | gnomAD-4.0.0 | 1.36839E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79889E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8264 | likely_pathogenic | 0.7429 | pathogenic | -2.263 | Highly Destabilizing | 0.863 | D | 0.533 | neutral | None | None | None | None | N |
I/C | 0.8959 | likely_pathogenic | 0.8533 | pathogenic | -1.533 | Destabilizing | 0.999 | D | 0.565 | neutral | None | None | None | None | N |
I/D | 0.9615 | likely_pathogenic | 0.9376 | pathogenic | -2.007 | Highly Destabilizing | 0.997 | D | 0.652 | neutral | None | None | None | None | N |
I/E | 0.8867 | likely_pathogenic | 0.8356 | pathogenic | -1.843 | Destabilizing | 0.997 | D | 0.641 | neutral | None | None | None | None | N |
I/F | 0.3983 | ambiguous | 0.3152 | benign | -1.269 | Destabilizing | 0.035 | N | 0.479 | neutral | N | 0.51100084 | None | None | N |
I/G | 0.9519 | likely_pathogenic | 0.918 | pathogenic | -2.752 | Highly Destabilizing | 0.997 | D | 0.64 | neutral | None | None | None | None | N |
I/H | 0.7812 | likely_pathogenic | 0.7222 | pathogenic | -2.04 | Highly Destabilizing | 0.999 | D | 0.673 | neutral | None | None | None | None | N |
I/K | 0.6843 | likely_pathogenic | 0.5876 | pathogenic | -1.74 | Destabilizing | 0.991 | D | 0.649 | neutral | None | None | None | None | N |
I/L | 0.2529 | likely_benign | 0.2033 | benign | -0.892 | Destabilizing | 0.509 | D | 0.473 | neutral | N | 0.496664485 | None | None | N |
I/M | 0.1968 | likely_benign | 0.1641 | benign | -0.811 | Destabilizing | 0.988 | D | 0.556 | neutral | N | 0.511601082 | None | None | N |
I/N | 0.6751 | likely_pathogenic | 0.5677 | pathogenic | -1.864 | Destabilizing | 0.996 | D | 0.663 | neutral | N | 0.513906755 | None | None | N |
I/P | 0.9894 | likely_pathogenic | 0.9822 | pathogenic | -1.325 | Destabilizing | 0.997 | D | 0.656 | neutral | None | None | None | None | N |
I/Q | 0.743 | likely_pathogenic | 0.6737 | pathogenic | -1.812 | Destabilizing | 0.997 | D | 0.664 | neutral | None | None | None | None | N |
I/R | 0.5733 | likely_pathogenic | 0.4857 | ambiguous | -1.348 | Destabilizing | 0.997 | D | 0.661 | neutral | None | None | None | None | N |
I/S | 0.7068 | likely_pathogenic | 0.6144 | pathogenic | -2.605 | Highly Destabilizing | 0.959 | D | 0.605 | neutral | N | 0.511817574 | None | None | N |
I/T | 0.6015 | likely_pathogenic | 0.4845 | ambiguous | -2.306 | Highly Destabilizing | 0.92 | D | 0.539 | neutral | N | 0.464989763 | None | None | N |
I/V | 0.174 | likely_benign | 0.1396 | benign | -1.325 | Destabilizing | 0.061 | N | 0.243 | neutral | N | 0.457223387 | None | None | N |
I/W | 0.9258 | likely_pathogenic | 0.8956 | pathogenic | -1.546 | Destabilizing | 0.999 | D | 0.692 | prob.neutral | None | None | None | None | N |
I/Y | 0.7594 | likely_pathogenic | 0.6986 | pathogenic | -1.285 | Destabilizing | 0.964 | D | 0.557 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.